| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4587 |
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| Symbol | |
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| ID | 3912404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5180924 |
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| End bp | 5182549 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637886491 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_488181 |
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| Protein GI | 86751685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0148874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGG AAGCTGCAAG GGTTGCTCAT TCCGATCACG CGCACGACGA TCACGCCCAT
GCGCATCCGA CCGGGTGGCG GCGCTACGTC TACTCGACCA ATCACAAGGA CATCGGCACG
ATGTATCTGA TCTTCGCGAT CGTCGCGGGG ATTATCGGCG GTGCGATGTC GATCGCGATC
CGGATCGAGC TGATGTACCC CGGCGTGCAG ATCTTCCACG AGAGCCACAC CTACAACGTG
TTCGTTACCT CGCACGGCCT GATCATGATC TTCTTCATGG TGATGCCGGC GATGATCGGC
GGGTTCGGCA ACTGGTTCGT GCCGCTGATG ATCGGCGCGC CCGACATGGC GTTCCCGCGG
ATGAACAACA TCTCGTTCTG GCTGCTGCCG GCGGCGTTCG CGCTGTTGCT GATCTCGACC
TTCGTCGAGG GCGAGCCGTC GTCGAACGGC GTCGGCGCGG GCTGGACGAT GTACGCGCCG
CTGTCGACCT CGGGGCATCC CGGCCCCGCC GTCGATTTCG CCATCCTGGC GCTGCATCTG
GCCGGCGCCT CCTCGATCCT CGGCGCCATC AACTTCATCA CCACGATCTT CAACATGCGC
GCGCCCGGCA TGACGCTGCA CAAGATGCCG CTGTTCGTGT GGTCGATCCT GGTCACCGTG
TTCCTGCTGC TGCTGTCGCT GCCGGTGCTC GCCGGCGCCA TCACCATGCT GCTGACCGAC
CGCAATTTCG GCACCACCTT CTTCTCCGCC GAAGGCGGCG GCGATCCGTT GCTGTTCCAG
CATCTGTTCT GGTTCTTCGG TCATCCCGAA GTCTACATCC TGATCCTGCC GGCGTTCGGC
ATGGTCAGCC AGATCGTCTC GACCTTCTCG AAGAAGCCGG TGTTCGGCTA TCTCGGCATG
GCCTATGCGA TGGTGGCGAT CGGCGTGATC GGCTTCGTGG TGTGGGCGCA CCACATGTAC
ACGGTCGGGA TGTCGAGCAC GACGCAGGCC TATTTCGTCG CCGCCACGAT GGTGATCGCG
GTGCCGACCG GGGTGAAGAT CTTCTCCTGG ATCGCCACGA TGTGGGGCGG CTCGATCGAG
TTCAAGACGC CGATGTTGTG GGCCGTCGGC TTCATCTTCC TGTTCACCGT CGGCGGCGTC
ACCGGCGTGG TGCTGGCCAA TGCCGGCGTC GACCGCGTGC TGCAGGACAC CTATTACGTC
GTCGCGCACT TCCACTACGT GCTATCGCTC GGCGCCGTGT TCGGGATCTT CGCCGGCTGG
TACTACTGGT TCCCGAAGAT GTTCGGCTAC ATGTACTCGG AGACCATCGG CAAGCTGCAT
TTCTGGGTGA CGTTCATCGG CGTCAACATG GTGTTCTTCC CGCAGCACTT CCTCGGCCTG
TCCGGCATGC CGCGGCGCTA CGTCGACTAT CCGGACGCGT TCGCCGGCTG GAACCTGGTG
TCGTCGATCG GCTCCTACAT CTCCGGCTTC GCCGTGCTGA TCTTCCTGTT CGGCATGGCG
CTGGCCTTCA TCCGCAAGGA GAAGGCCGCC GACAATCCGT GGGGCGCCGG CGCCACCACG
CTGGAATGGA CGCTGTCGTC GCCGCCGCCG TTCCATCAGT TCGAAGTGCT GCCGCAGGTC
CGCTGA
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| Protein sequence | MTMEAARVAH SDHAHDDHAH AHPTGWRRYV YSTNHKDIGT MYLIFAIVAG IIGGAMSIAI
RIELMYPGVQ IFHESHTYNV FVTSHGLIMI FFMVMPAMIG GFGNWFVPLM IGAPDMAFPR
MNNISFWLLP AAFALLLIST FVEGEPSSNG VGAGWTMYAP LSTSGHPGPA VDFAILALHL
AGASSILGAI NFITTIFNMR APGMTLHKMP LFVWSILVTV FLLLLSLPVL AGAITMLLTD
RNFGTTFFSA EGGGDPLLFQ HLFWFFGHPE VYILILPAFG MVSQIVSTFS KKPVFGYLGM
AYAMVAIGVI GFVVWAHHMY TVGMSSTTQA YFVAATMVIA VPTGVKIFSW IATMWGGSIE
FKTPMLWAVG FIFLFTVGGV TGVVLANAGV DRVLQDTYYV VAHFHYVLSL GAVFGIFAGW
YYWFPKMFGY MYSETIGKLH FWVTFIGVNM VFFPQHFLGL SGMPRRYVDY PDAFAGWNLV
SSIGSYISGF AVLIFLFGMA LAFIRKEKAA DNPWGAGATT LEWTLSSPPP FHQFEVLPQV
R
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