Gene RPB_4556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4556 
Symbol 
ID3912373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5150083 
End bp5151126 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content62% 
IMG OID637886460 
Productcobalamin synthesis protein, P47K 
Protein accessionYP_488150 
Protein GI86751654 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.107913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CCGCCGCCTC GAAAATTCCC GTCACCGTGC TCACCGGCTA TCTCGGCGCC 
GGCAAGACGA CGCTGCTCAA CCGCATCCTG TCGGAGAATC ACGGCAAGAA ATACGCGGTG
ATCGTCAACG AGTTCGGCGA GATCGGCATC GACAACGACC TGATCATCGG TGCCGACGAG
GAAGTGTTCG AGATGAACAA TGGCTGCGTC TGCTGCACGG TGCGCGGCGA CCTGGTCCGG
ATTCTCGGCG GGCTGATGAA GCGCAAGGGC AAGTTCGACG CCATCATCGT CGAGACCACC
GGGCTCGCCG ATCCGGCGCC GGTGGCGCAG ACCTTCTTCG TCGACGAGGA CGTGATGGCG
AGCGCACGGC TCGACGCGGT GGTGACGGTG GCCGACGCCA AATGGCTGAG CGACCGCCTC
AAGGATGCGC CCGAGGCCAA GAACCAGATC GCCTTCGCGG ACGTCATCGT GCTCAACAAG
ACCGACCTCG TCACCAAGGC CGAACTCGCC GAAGTCGAGG CGCGGATCCG CGCGATCAAT
CCCTATGCCC GGCTGCATCA CACCGAACGC TGCCAGATCC CGATCGCCGA CGTACTCGAT
CGCGGCGCGT TCGATCTCGA CCGCATTCTG GAGATCGAGC CGGAGTTTCT CGATGCCGGC
GACGATCACG ATCACCACCA TGATCACGAT CATGGTCATC ATCATCACGA CCACCACGGC
CACGGCCTGA AGCACTATCA CGATGAGGAC ATGCAATCGC TGTCGCTGAA GAGCGACAAG
CCGATCGACC CGGCGAAGTT CATGCCCTGG CTGCAGCAAT TGGTGCAGAC CGAAGGCGGA
AAGATCCTGC GCTCCAAGGG GATTCTGTCT TTTGCGGGTG ACGACGACCG CTACGTGTTT
CAGGGCGTGC ACATGATGCT CGAGGGCGAT CACCAGCGCG CCTGGAAGGA CGACGAGCCG
CGCGAAAGCC GCGTCGTGTT CATCGGTCGC GAATTGCCCG AACAGGCGAT CCGCGACGGC
TTCGCGAAGT GCGTGGCGCA ATGA
 
Protein sequence
MTNSAASKIP VTVLTGYLGA GKTTLLNRIL SENHGKKYAV IVNEFGEIGI DNDLIIGADE 
EVFEMNNGCV CCTVRGDLVR ILGGLMKRKG KFDAIIVETT GLADPAPVAQ TFFVDEDVMA
SARLDAVVTV ADAKWLSDRL KDAPEAKNQI AFADVIVLNK TDLVTKAELA EVEARIRAIN
PYARLHHTER CQIPIADVLD RGAFDLDRIL EIEPEFLDAG DDHDHHHDHD HGHHHHDHHG
HGLKHYHDED MQSLSLKSDK PIDPAKFMPW LQQLVQTEGG KILRSKGILS FAGDDDRYVF
QGVHMMLEGD HQRAWKDDEP RESRVVFIGR ELPEQAIRDG FAKCVAQ