Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4527 |
Symbol | |
ID | 3912344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5116506 |
End bp | 5117240 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886431 |
Product | 3-oxoacyl-acyl carrier protein reductase |
Protein accession | YP_488121 |
Protein GI | 86751625 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC TCGATTTTGG CGGCCAGCAG ATGCTGATCG TCGGCGGCTC GAGCGGCATC GGCAACGGCA TCGCGCAGGC GTTTCGCACG CGCGGCGCGA AAGTCTGCGT CACCGGCACC CGGGCGCAAA CGTCCGACTA CGCACCCGAA GACGGTAGCG ATTTCGGCGG GCTGACTTAC GCGCAGCTCG ACGTCAGCAA GCCACAGGCG ATCGAGGCGT TCGCGCCGGC GCTGGAGCGG CTCGACGTGC TGGTGCTGGC GCAGGGCGCG GTGATCTATC GTCGCGGCGA GTTCGCGATG GACGGCTTCC GCCACGTGAT GGAGGTCAAT CTGATCAGCC TGATGGCCTG CGCGGTGAAG TTTCATCCGC TGCTCAAGGC GTCGTCCGGC AAGCTGATCA TCGTCTCATC CACCGCGGCG TTTCACGCCA CCAAGGGCAA CCCGGCCTAC AACGCCTCGA AGACCGGCGC GATGGGGCTG ACCCGGACGC TGGCGCAGGC CTGGGCCGAG GACGGCATCC GCGTCAACGG CATCGCGCCC GGCCTGGTCG ATACCAAAAT GACCAAGGTC ACCACCGCCA ATCCGAAGCG GCTCGCCGGC GCCATCGAGG GCATTCCGAT GCGGCGGCTC GGCACGCCGC AGGAGATGGC CGGCGCGGCG TTGTTTCTCG CCTCGCCGTT GTCGTCCTAC GTGCTCGGCC AGACCCTGGT GGTCGATGGC GGGCTGATTT TGTAG
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Protein sequence | MNDLDFGGQQ MLIVGGSSGI GNGIAQAFRT RGAKVCVTGT RAQTSDYAPE DGSDFGGLTY AQLDVSKPQA IEAFAPALER LDVLVLAQGA VIYRRGEFAM DGFRHVMEVN LISLMACAVK FHPLLKASSG KLIIVSSTAA FHATKGNPAY NASKTGAMGL TRTLAQAWAE DGIRVNGIAP GLVDTKMTKV TTANPKRLAG AIEGIPMRRL GTPQEMAGAA LFLASPLSSY VLGQTLVVDG GLIL
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