Gene RPB_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4527 
Symbol 
ID3912344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5116506 
End bp5117240 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID637886431 
Product3-oxoacyl-acyl carrier protein reductase 
Protein accessionYP_488121 
Protein GI86751625 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC TCGATTTTGG CGGCCAGCAG ATGCTGATCG TCGGCGGCTC GAGCGGCATC 
GGCAACGGCA TCGCGCAGGC GTTTCGCACG CGCGGCGCGA AAGTCTGCGT CACCGGCACC
CGGGCGCAAA CGTCCGACTA CGCACCCGAA GACGGTAGCG ATTTCGGCGG GCTGACTTAC
GCGCAGCTCG ACGTCAGCAA GCCACAGGCG ATCGAGGCGT TCGCGCCGGC GCTGGAGCGG
CTCGACGTGC TGGTGCTGGC GCAGGGCGCG GTGATCTATC GTCGCGGCGA GTTCGCGATG
GACGGCTTCC GCCACGTGAT GGAGGTCAAT CTGATCAGCC TGATGGCCTG CGCGGTGAAG
TTTCATCCGC TGCTCAAGGC GTCGTCCGGC AAGCTGATCA TCGTCTCATC CACCGCGGCG
TTTCACGCCA CCAAGGGCAA CCCGGCCTAC AACGCCTCGA AGACCGGCGC GATGGGGCTG
ACCCGGACGC TGGCGCAGGC CTGGGCCGAG GACGGCATCC GCGTCAACGG CATCGCGCCC
GGCCTGGTCG ATACCAAAAT GACCAAGGTC ACCACCGCCA ATCCGAAGCG GCTCGCCGGC
GCCATCGAGG GCATTCCGAT GCGGCGGCTC GGCACGCCGC AGGAGATGGC CGGCGCGGCG
TTGTTTCTCG CCTCGCCGTT GTCGTCCTAC GTGCTCGGCC AGACCCTGGT GGTCGATGGC
GGGCTGATTT TGTAG
 
Protein sequence
MNDLDFGGQQ MLIVGGSSGI GNGIAQAFRT RGAKVCVTGT RAQTSDYAPE DGSDFGGLTY 
AQLDVSKPQA IEAFAPALER LDVLVLAQGA VIYRRGEFAM DGFRHVMEVN LISLMACAVK
FHPLLKASSG KLIIVSSTAA FHATKGNPAY NASKTGAMGL TRTLAQAWAE DGIRVNGIAP
GLVDTKMTKV TTANPKRLAG AIEGIPMRRL GTPQEMAGAA LFLASPLSSY VLGQTLVVDG
GLIL