Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4521 |
Symbol | |
ID | 3912338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5108270 |
End bp | 5109664 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886425 |
Product | lytic murein transglycosylase |
Protein accession | YP_488115 |
Protein GI | 86751619 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.758716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAA CTGGCAACAG GCTAGCGCGG GTCGCAGGGA TGGCCGTACT CGGCGCCGTG CTGCACACGG GCGCCGCGCA GGCGCAGAAC CCGTTCGACG TGTTCAATCT GTTCGGCGGC AAGAGCGCCG CGCCGAATGC GCCGCAGCCC GCCAATGTCG GCCCGCAAAA GCCCGCTTCG CAGCAAGGCA GCAGCGCTGC GCCGCCGTGG AGCGGCGAGG ACGGCGGCTC CGGCCATCCG ACGATGACCG CGCAGGCGAT CCGCGAGGCC GCCGCCAATT TCGACAATTG CGTCGCCGGC TTCTGGCCGG ACGCTCAGCG CCGCGGCATC TCGCGCGACA GCTTCGCGCG CTTCACCGCG GGGCTGTCGC CCGATCTGCG GCTGATGGAC CTGATGGATT CGCAGCCGGA ATTCACCAAG GCGATCTGGG AGTATCTCGA CATCCTGGTG AACGACAACA GGATGGCGCG GGGCCGCGAG ATCCTGGCGC AATACAAGCC GCAATTCGAC GCGGTGGAGC GCGCGTATGG CGTCGACCGC TACATCATTG CGTCGATCTG GGGCATCGAG TCGAACTACT CGACCCAGAT GGGCGACCGC TATGTGCTGA ACTCGACCGC GACGCTGGCC TGCGTCGGCC GCCGCCAAAA CTACTTCAAG GACGAATTCC TCACCGCGTT GGAGATCCTG CATCGCGGCG ATCTGCGTCC CGAGCAGTTG CGCGGCTCGT GGGCCGGCGC GTTCGGCCCG ACGCAGTTCA TGCCGACCGC GTTCAAGCGC TTCGCCGTCG ACGCCGACGG CGACGGCCGC CGCGACGTCG TCGACAATCC CGCCGACCTG ATCGCCTCGA CCGCCAACAA CCTCAAGAAG GACGGCTGGC AGAGCGGCCA GACCTGGGGC TACGAGGTCG CGGTGCCGCG CGGCTTCGAC TACATGAAGG CCGACCGCAA GCAGATGCTG ACGCTGGCGC GATGGGAAGA GCTCGGCGTC CGCCGCCCGA ACGGCCAGCC GTTCCCGCGC GGCGGCGAAA AGGCCTATCT GCTGGCGCCC GCCGGCGCCG AAGGCCCCGG CTTCCTGATG CTGACCAATT TCCGCGTCAT CATGAAGTAC AACCCCGCCG AAGCCTATGC GCTGGCGATC GGCCATTTCG CCGACCGCCT GCGCGGCGGT CCGCCCTTCG TCCAGCCCTG GCCGCGCCAC GAACGCGTGC TGTCCCGCAG CGAACGCCTC GAACTGCAAC AACTCCTCGC CCAACGCGGC TTCTACCGCG GCACCCCCGA CGGCCAATTC GGCAGCCTGA CGCGGGAAGG ACTCCGGAAT TTCCAGGCGT CCATTGGGGC CCCGGCGGAT GGATTTGCCA CGGGGGAGAT GCTGGAGAGG TTGAGAGGAA GGTAG
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Protein sequence | MTETGNRLAR VAGMAVLGAV LHTGAAQAQN PFDVFNLFGG KSAAPNAPQP ANVGPQKPAS QQGSSAAPPW SGEDGGSGHP TMTAQAIREA AANFDNCVAG FWPDAQRRGI SRDSFARFTA GLSPDLRLMD LMDSQPEFTK AIWEYLDILV NDNRMARGRE ILAQYKPQFD AVERAYGVDR YIIASIWGIE SNYSTQMGDR YVLNSTATLA CVGRRQNYFK DEFLTALEIL HRGDLRPEQL RGSWAGAFGP TQFMPTAFKR FAVDADGDGR RDVVDNPADL IASTANNLKK DGWQSGQTWG YEVAVPRGFD YMKADRKQML TLARWEELGV RRPNGQPFPR GGEKAYLLAP AGAEGPGFLM LTNFRVIMKY NPAEAYALAI GHFADRLRGG PPFVQPWPRH ERVLSRSERL ELQQLLAQRG FYRGTPDGQF GSLTREGLRN FQASIGAPAD GFATGEMLER LRGR
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