| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4490 |
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| Symbol | |
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| ID | 3912306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5077474 |
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| End bp | 5079399 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637886393 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_488084 |
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| Protein GI | 86751588 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.85611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAG CAAGCAAACG GCAGAGCTCA GAGTCCAAGG GGCTGGAGCC CAAGGTGCTG
GAGCCGGCCA CCTCGGCGAT CGCCCTGTCG CTGGATGCGA TCGCGGCCAC CGAGAATGTC
GGGCCGCGCA CCGGCACGCT GCGCGCCGAC GCCGATGTCA GCGCGGTCGA GGACGTCGCC
AGGCGCGGCC GGCTGCGCCC GCTGCTGGCG CTGGCGCCCT ACGTCGCGCG CTATCGCGGC
CGGGCGCTGA TGGCGCTCAC CGCGCTGATC GTCGCCGCGC TGACCACGCT GATGGTGCCG
CTCGCGGTGC GCCGGCTGAT CGATATCGGC TTTTCCGGCG ACGGCATCGA GCTGATCAAC
AGCTACTTCA GCGTGATGCT GATCGTCGTC GGCGTGCTCG CCGTCGCCAG CGCCGCGCGC
TATTATCTGG TGATGACGAT CGGCGAACGG ATCGTCGCCG ACGTCCGCCG CGACGTCTTC
CGGCATCTCA CCGCGCTGTC GCCGTCGTTC TTCGATTCGG CGCGCAGCGG CGAGCTGATC
TCGCGCCTCA CCGCCGACAC CACCCAGATC AAATCCGCGG TCGGCGCCTC GGTGTCGATC
GCGCTGCGCA ACATCCTGCT GTTCGCCGGC GCCATCACCA TGATGGTGAT TTCGAGCCCG
CGCTTGAGCG GCTTCGTGCT GGCGGCGATT CCGCTGATCG TGATTCCGCT GGTGGCGTTC
GGCCGTTGGG TACGGCGGCT GTCGCGCAAC GCCCAGGACA CGCTGGCGGA CGCTTCCGCT
TTCGCCTCCG AACTGGTCGG CGCGATGCGC ACGGTGCAGG CCTACACCAA CGAGCGGCTC
GCCAATGCGC GGTTCGGCGC CGAGGTCGAG CAATCCTACG AGGCGGCGCG CAGCTCGACC
CAGGCCCGCG CGATCCTCAC CGCGATCATC ATCTTCATCG TGTTCGCCAG CGTGGTGGCG
ATCCTGTGGG TCGGCTCCAA CGACATCGCC ACCGGCACGA TCACGCCGGG CCGGCTCGGC
CAGTTCATCC TGTACGCGGC GTTCGCCGCC TCCAGCCTCG GCCAGCTCAG TGAAGTCTGG
GGCGAAGTCT CCGCCGCATC CGGCGCCGCC GAGCGGCTGT TCGAGATCCT GCGGATCAAG
CCGGCGATCG CCGCGCCGGC GAAGCCGCGC CCGCTGCCGG TGCCGGTGCG CGGCGAGGTC
ACCTTCGACA ATGTTTCCTT CGCCTATCCG ACGCGCCCGG ATCATCTCGC CGTGAACGGT
CTGTCGCTGT CGATCAGAGC CGGCGAGAAG GTGGCGATCG TCGGCCCCTC GGGCGCCGGC
AAGAGCACGC TGTTTCACCT GCTGCTGCGG TTCTACGACC CCGCCGCCGG CACGATTTCG
ATCGACGGCG TGCCGATCGC GCAGGCTGAT CCGCAGGCGG TGCGCGAGCG GATCGCGCTG
GTGCCGCAGG ACTCCGTGGT GTTCGCCGCC ACCGCGCGCG ACAACATCCG GTTCGGCCGC
GACGACGCCA GCGACGCCGA TGTCGAGCGC GCCGCGCAGC AGGCCCACGC CACCGAATTC
ATCACCCGGC TGCCGAACGG CTTCGAGGCC CAGCTCGGCG AGCGCGGCGT CACGCTGTCG
GGCGGCCAGC GCCAGCGCAT CGCCATCGCC CGCGCCATCC TGCGCGACGC GCCGCTGTTG
CTGCTCGACG AGGCGACCTC GTCGCTCGAC GCCGAAAGCG AGACGCTGGT GCAGACCGCG
CTGCAGGGAC TGATGCGTGA CCGCACCACG CTGGTGATCG CGCATCGGCT GGCCACCGTG
CTGTCCTGCG ACCGCATCCT GGTGATGGAA AACGGCCGCA TCGTCGAACA AGGCACCCAC
GCCCAGCTCG TCGCCCGCGG CGGCCTCTAC GCGCGGCTGG CCAAGCTGCA ATTCGAGGCG
GCGTAG
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| Protein sequence | MTTASKRQSS ESKGLEPKVL EPATSAIALS LDAIAATENV GPRTGTLRAD ADVSAVEDVA
RRGRLRPLLA LAPYVARYRG RALMALTALI VAALTTLMVP LAVRRLIDIG FSGDGIELIN
SYFSVMLIVV GVLAVASAAR YYLVMTIGER IVADVRRDVF RHLTALSPSF FDSARSGELI
SRLTADTTQI KSAVGASVSI ALRNILLFAG AITMMVISSP RLSGFVLAAI PLIVIPLVAF
GRWVRRLSRN AQDTLADASA FASELVGAMR TVQAYTNERL ANARFGAEVE QSYEAARSST
QARAILTAII IFIVFASVVA ILWVGSNDIA TGTITPGRLG QFILYAAFAA SSLGQLSEVW
GEVSAASGAA ERLFEILRIK PAIAAPAKPR PLPVPVRGEV TFDNVSFAYP TRPDHLAVNG
LSLSIRAGEK VAIVGPSGAG KSTLFHLLLR FYDPAAGTIS IDGVPIAQAD PQAVRERIAL
VPQDSVVFAA TARDNIRFGR DDASDADVER AAQQAHATEF ITRLPNGFEA QLGERGVTLS
GGQRQRIAIA RAILRDAPLL LLDEATSSLD AESETLVQTA LQGLMRDRTT LVIAHRLATV
LSCDRILVME NGRIVEQGTH AQLVARGGLY ARLAKLQFEA A
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