| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4478 |
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| Symbol | |
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| ID | 3912294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5067751 |
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| End bp | 5069289 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886381 |
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| Product | carboxylyase-like protein |
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| Protein accession | YP_488072 |
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| Protein GI | 86751576 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0662178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCC GCGTCAAACC GCCCTTTCCG GACCTCCGCG CTTTCGCCGC CTATCTGGAA
TCCCGCGGGC AGTTGCACCG GATCAAGAAG CCGGTCTCGG TGGTCCACGA ACTGACCGAA
ATCCATCGCC GCGTGCTGCA CGCCGGCGGC CCGGCGCTGC TGATCGAACA TCCGGTCAAG
GCCGACGGCA CGCCGTCGGA GATGCCGATT CTGGTCAATT TGTTCGGCAC CGTCGAGCGG
GTGGCGTGGG GGCTCGGCAT CGAACCGCAA AATCTGTCGG CGCTGGGCGA AGCGCTCGCC
GAAATGCGCG AGCCGGCGCC GCCGCAAAGC CTCACCGACG CATTGAGCAA ATTGCCGATG
GCCCGCGCAG CGCTGTCGAT GCGGCCGAAG ACCGCCAAGA CCGCACCGGC GCAGGACGTG
GTGCTGACCG GGGACGCGGT CGATCTCGGC CGGCTGCCGA TCCAGATTCC GTGGCCGGGC
GAGCCGGCGC CGCTGATCAC CTGGCCGCTG GTGTTCACCA GGCCGCCACC CGGCGCGCCC
GGCACCGACA ATGTCGGCGT CTACCGCATC CAGGTGCTGG GCAAGGATCG CATCATCATG
CGCTGGCTGG CGCATCGCGG CGGCGCCAAG CATCACCACC AATGGAAGGC CGAGGGGCGC
GAGATGCCGG TCGCGATCGT GATCGGCGCC GACCCGGCGA TGATCCTGTC GGCGGTGCTG
CCGCTGCCGG AGAATATCTC CGAGATCAAA TTCTCCGGGC TGCTGCGCGG CGACCGCCCG
AGCATGACGC CCTGCGTCGG GATTCCGCTG AACGTGCCGG CCGACGCCGA GATCGTGCTG
GAAGGCTTCG TGTCGCCGAC CGAGACCGCG CCGGAGGGCC CCTATGGCGA CCACACCGGC
TATTACAACG CGGTCGAGGA ATTCCCGGTG ATGCGGATCA CCGCGATCAC GATGCGGCGC
AGTCCGATCT ATCTGTCGAC CTATACGGGG CGTCCGCCGG ACGAGCCGTC GCGGCTCGGC
GAGGCGTTCA ACGACGTGTT CCTCCCCGTC GCGCGGCGGC AGTTTCCGGA GATCGTCGAT
CTGTGGCTGC CGCCGGAGGC GTGCTCCTAT CGAATTGCGG TCGCCTCGAT CAAGAAACGC
TATCCCGGCC AGGCGCGGCG GCTGATGATG GGGCTGTGGT CGATGCTGCC GCAGTTCAGC
TACACCAAGC TTTTGATCAT CGTCGACGAC GACGTCGACG TGCGCGACTG GGCCGACGTG
ATGTGGGCGG TGTCGACCCG CGCCGACACC TCGCGCGACA TGCTGTCGAT CAGCGATACG
CCGATCGACT ATCTCGATTT CGCCTCGCCG AAATCCGGGC TCGGCGGCAA GCTGGGCATC
GACGCCACCA ACAAGATCGG CACCGAGACC GAGCGCGAAT GGGGCAAGGT GCTGGAGATG
GACAAGGACG TGATCGCGCG GGTCGACGCA ATGTGGTCGA GCCTCGGGCT GCCCCCGGCG
CCGACGCCGG CCCTGGCGCA ACGCAGGCTG CTGCGATGA
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| Protein sequence | MLSRVKPPFP DLRAFAAYLE SRGQLHRIKK PVSVVHELTE IHRRVLHAGG PALLIEHPVK
ADGTPSEMPI LVNLFGTVER VAWGLGIEPQ NLSALGEALA EMREPAPPQS LTDALSKLPM
ARAALSMRPK TAKTAPAQDV VLTGDAVDLG RLPIQIPWPG EPAPLITWPL VFTRPPPGAP
GTDNVGVYRI QVLGKDRIIM RWLAHRGGAK HHHQWKAEGR EMPVAIVIGA DPAMILSAVL
PLPENISEIK FSGLLRGDRP SMTPCVGIPL NVPADAEIVL EGFVSPTETA PEGPYGDHTG
YYNAVEEFPV MRITAITMRR SPIYLSTYTG RPPDEPSRLG EAFNDVFLPV ARRQFPEIVD
LWLPPEACSY RIAVASIKKR YPGQARRLMM GLWSMLPQFS YTKLLIIVDD DVDVRDWADV
MWAVSTRADT SRDMLSISDT PIDYLDFASP KSGLGGKLGI DATNKIGTET EREWGKVLEM
DKDVIARVDA MWSSLGLPPA PTPALAQRRL LR
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