| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4452 |
|---|
| Symbol | |
|---|
| ID | 3912267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 5039443 |
|---|
| End bp | 5039910 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637886354 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_488046 |
|---|
| Protein GI | 86751550 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG ATCCGATTTT GCCGACGGTG CTGGTCGCCG AGGACCACGA CTACGACAAG
CTGATCCTGA CCGAAGTGTT CGGTCGAGCC GGCATCAAGG CGGATATCCG ATTCGTCAGT
GACGGCGAGC AGATGCTCGA CTATCTCAAG CGCCGCCACC ACTACGCCGA GGAGGGCTCG
GCGCCGACGC CGACGCTGAT CCTGCTCGAC CTCAACATGC CGCGGTTGGA CGGGCGCAAG
GTGATCCGCA TCCTGCGCGC CGACGAGGCT ATTCGCCATC TGCCGGTGAT CGCGCTGTCC
ACCTCGGAGA GCCCGAAGCA CATCACCGAG GCCTACTCGA TTGGGATCAA CGCCTACCTC
GTCAAGCCGG CCAGTATCCC CGACTACGTC TCCGCGATCG AATCGCTCTG GCAATTCTGG
ATGAAGACTG CGTCTCTGCC GATGACGGAG AGGTTCGGCC ATGAGTAG
|
|---|
| Protein sequence | MNRDPILPTV LVAEDHDYDK LILTEVFGRA GIKADIRFVS DGEQMLDYLK RRHHYAEEGS
APTPTLILLD LNMPRLDGRK VIRILRADEA IRHLPVIALS TSESPKHITE AYSIGINAYL
VKPASIPDYV SAIESLWQFW MKTASLPMTE RFGHE
|
|---|
| |