Gene RPB_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4446 
Symbol 
ID3912261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5031484 
End bp5032905 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content68% 
IMG OID637886348 
ProductPucC chlorophyll MFS exporter 
Protein accessionYP_488040 
Protein GI86751544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.742071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG TCAGCCAAAA AGCGATGAAG CTGTGGGCCT CCTTGGGGTC TCGCTTTCTG 
CCGTTCGCGG ATGCGGCGAC GCCGGATCTG CCGCTGTCGC GGTTGCTGCG CCTGTCGCTG
TTTCAGGTGG CGGTGGGCAT GTCGCTGGTG CTGCTGGTCG GCACTTTGAA CCGCGTGATG
ATCGTCGAAC TCAACGTGCC GGCCTCGATC GTCGGCGTGA TGGTGTCGCT GCCGTTGCTG
TTTGCGCCGT TCCGCGCGCT GATCGGTTTC AAATCCGACG TCCACAAATC CGTGCTCGGC
TGGCGCCGCG TTCCCTTCCT CTATAAGGGC ACGCTGGTGC AATTTGGCGG CCTGGCGATC
CTGCCGTTCG CGCTCCTGGT GCTGTCCGGC AGCGGCGATG CGGGCAACGC CCCGGTGTGG
ATCGGACAAT TCGGCGCGGC GCTGGCGTTC CTGCTGATCG GCGCCGGCGT GCACACCACC
CAGACCGTCG GCCTCGCGCT CGCCACCGAC CTCGCCTCGC CGGAATCGCG GCCGAAGGTC
GTCGGCCTGA TGTACACCAT GCTGATGTTC GGCATGATCG CCGCGGCGAT CGTGTTCGGC
ATGCTGCTCG CTGATTTTTC GCCCGGCCGC CTGATTCAGG TGATCCAGGG CTCGGCCGTC
GTCACCATCG TTCTCAACGG CATCGCCGTC TGGAAGCAGG AAGCGCGGCG CACCTCCGGC
GCGACGCAGG CGACCGCGCA TCCCGGCGCG CCCTCCGCGA GCTTCCGCGA ATCCTGGGAC
GTCTTCATCC AGGGCAAGGA CGCGATGCGC CGGCTGATCG CGGTCGGCTT CGGCACCATG
GCGTTCAGCA TGGCGGACGT GCTGCTCGAA CCCTATGGCG GCCAGATCCT GTCGATGTCG
GTCGGCGACA CCACCAAGCT CACCGCGGCG CTCGCGGTCG GCGGTCTGCT CGGCTTCGGC
CTCGCCTCGC GGGTGCTGAG CCGCGGCGCC GATCCGTTCC GGATGGCGAG CTTCGGCTCG
CTGGTCGGAA TCCCGGCCTT CCTCGCGGTG ATCTTCGCCG CCGAACTGCA GGGCGCCGCG
TCGGTGCTGA CATTCGGCTG CGGTACCGCG CTGATCGGCT TCGGCGCCGG CCTGTTCGGC
CACGGCACGC TGACCGCGAC GATGAACGCC GCGCCGAAGG ACCAGGCCGG CCTCGCGCTC
GGCGCCTGGG GCGCGGTGCA GGCCTCCGCG GCCGGCGTGG CGATCGCGCT GGGCGGCATC
ATCCGGGATG TCGTGACGGC GTTCGCTCCG CAGTTCGGCC CGGCCGCCGG CTACAACGCC
GTCTACGGCC TCGAGCTGCT GCTGTTGCTG GCGACGCTCG TGACGATGGT CCCGCTGATC
AAGCGACGGG ACACATTGTT GATGCAGGGA CAACTGAACT GA
 
Protein sequence
MNPVSQKAMK LWASLGSRFL PFADAATPDL PLSRLLRLSL FQVAVGMSLV LLVGTLNRVM 
IVELNVPASI VGVMVSLPLL FAPFRALIGF KSDVHKSVLG WRRVPFLYKG TLVQFGGLAI
LPFALLVLSG SGDAGNAPVW IGQFGAALAF LLIGAGVHTT QTVGLALATD LASPESRPKV
VGLMYTMLMF GMIAAAIVFG MLLADFSPGR LIQVIQGSAV VTIVLNGIAV WKQEARRTSG
ATQATAHPGA PSASFRESWD VFIQGKDAMR RLIAVGFGTM AFSMADVLLE PYGGQILSMS
VGDTTKLTAA LAVGGLLGFG LASRVLSRGA DPFRMASFGS LVGIPAFLAV IFAAELQGAA
SVLTFGCGTA LIGFGAGLFG HGTLTATMNA APKDQAGLAL GAWGAVQASA AGVAIALGGI
IRDVVTAFAP QFGPAAGYNA VYGLELLLLL ATLVTMVPLI KRRDTLLMQG QLN