| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4423 |
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| Symbol | fbiC |
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| ID | 3912238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5010288 |
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| End bp | 5012750 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886328 |
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| Product | FO synthase |
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| Protein accession | YP_488020 |
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| Protein GI | 86751524 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.308289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGT CCCGATCGGA CGACGATGTT CGAACCCAAG ACGAACGCCG TGGTCGGCGG
CACAATGAGA TGAAGGTCGA CGACATGGTG TGGGACACGC GGGACGCCGA AGCTCTGTTG
CGGGCGTACC AGGCGATGCC GATGGCGGAA CTGCTCGACG AGGCCGCGAC GCTCGCCCGC
GACGGTCACC GCCATGTGAT CAGCTACTCG CGCAAGGTGT TCGTGCCGCT GACCCGTCTG
TGCCGCGACA GCTGCGGCTA CTGCACCTTC GCCAAAACGC CGCGCCAGGT CGAGGCGGCC
TTCCTGTCGC CGGACGATGT GCTGGCGATC GTCCGGGCCG GGCAGGCGGC TGGCTGTCAC
GAGGCGCTGC TGACGCTCGG CGACAAGCCC GAGGCACGCT ACGCCGCCGC GCGAGAATTT
CTTGCGGCGC AGGGCGTCGC GACGACGGTC GACTACGTCG AGAAGATCTG CAAGCTGATC
CTGGCCGAGA CCGGCCTGCT GCCGCACGTC AATGCCGGCG TGATGAGTGA AGCGGAGACC
GCGCGGCTGC GCAAGGTGAG CGTGTCGCAG GGCATCATGC TGGAGAGCGT GTCCGAGCGG
CTGTGCGCGC GCGGCGAGGC GCATTTCGGC TCGCCCGACA AATTGCCGGC GGTGCGGCTG
GACGCGATCG CGGCCGCGGG CAGGCTGCGG GTGCCGTTCA CCAGCGGAAT TCTGATCGGC
ATCGGTGAGA CCCGCCTCGA GCGGGTGCAA TCGCTGCTGG CGCTGCGCTC GCTGCATCGG
CGCTACGGGC ATCTGCAGGA AATCATCGTG CAGAATTTCC GCGCCAAGGC CGATACGCGG
TTCGCGGACC GGCACGAGCC CGGACTTGAA GACCTGCTGT GGACCGCCGC GGTGGCGCGC
CTGATCTTCG GGCCGAAGAT GAACATCCAG GTGCCACCGA ACCTCAGCTA CGCGGATTAT
CCGCGGCTGC TGGAAGCCGG CATCAACGAC TGGGGTGGGA TTTCGCCGGT CACCGCCGAT
CACGTCAATC CGGAAGCGCC GTGGCCGGAG ATCGCGCGGC TGCAGCAGGC GACCGAAGCG
GTCGGGCTGA CGCTGCAGCC CCGGCTCGCG GTGTATCCCG CCTATGTTCG CCACGCCGCG
GACTGGATCG ATCCGGCGCT GCTGCCGAAG GTCCTGAAAG CGGTCGACGC CGACGGCTTC
CCGCGCGACG ATGGTTGGAT GCCGGGCGGT CTGGCGCCGA TCCCGCCGAC CGGCGCCGCG
CGCCGCAGCG ACCCTTCGCT GGAGGCACTC GTCGTCCGCG CGGCGGGCGG GACGCGGCTG
TCGCAGCCCG AGGTGCAGGC GCTGTTCGGC GCGCGCGGCG GCGACGTCGA CATGATCTGC
GAGGCGGCCG ACGCGGTGCG AGCGGCGTCG AGCGGCGAGA CCGTGCGCTA CGTCGTCAAC
CGCAACATCA ACTACACCAA TGTCTGCAGC TACGCCTGCA AGTTCTGCGC GTTCTCCAAG
GGCAAGACCC ACGACCATCT GCGCGGGAGG CCCTACGACC TGTCGCTCGA GGAGGTTGCG
CGTCGCGCCC GCGAAGCGTG GGATCGCGGC GCGACCGAAG TCTGCATGCA GGGTGGCATC
AACCCGCACT ACACCGGCAA GACCTATGTG GATCTGTTGC GCGCGGTGAA GAACGAAGTG
CCGCAGATGC ACGTCCACGC GTTCTCGCCT TTGGAAGTGA GCCAAGGTGC GGCCACCCTG
GGCATGTCGG TGTCGAACTT CCTGTCGATG CTGCGCGACG AAGGCCTCGG CTCGCTGCCC
GGCACCGCTG CCGAAATCCT CGACGACAAG GTGCGGCAGG TCATCTGCGC CGACAAGCTC
GACACGCAGA TCTGGCTGGA CATCGTGCGC AGTGCGCATC GGGTCGGTCT GCGCACCACG
GCGACGATCA TGTTCGGCCA CGTCGAAGGA TCCGACAGCT GGGCCGCGCA TCTGTTGCGA
ATTCGCGATC TGCAGGAGCA GACCGGCGGC TTCACCGAAT TCGTGCCGCT GCCGTTCATC
CATATGGAAG CGCCGATGTC GCTGCGCGGC CAGGCGCGCA GCGGCCCGAC CTGGCGCGAG
GTGCGGCTGA TGCATGCGGT GGCGCGGCTG GTCTTGTATC CGCTGATCAC CAATATTCAG
GCCTCCTGGG TGAAGCTCGG CGAGGACGGC GTCGCGAGTC TTCTGCGGTC CGGCGTCAAC
GATCTCGGCG GCACGCTGAT GAACGAGAGT ATCTCGCGCG CCGCCGGTAC CCAGCATGGG
CAGGAATTGG CGCCCGAAGC GATGGAAGCC CTGATCACGC GAGCCGGCCG GGTCGCCGAG
CAGCGGACGA CGCTGTATCG CCCGGTCGAT GCCGAGCGCC GCGACGCCAG CTTCGCCGCG
CCGGAGCTGC AGGATCTGGT GATGACACCG TTCGTGCCGA AGCAGATGGC GCTGGCACGA
TGA
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| Protein sequence | MIASRSDDDV RTQDERRGRR HNEMKVDDMV WDTRDAEALL RAYQAMPMAE LLDEAATLAR
DGHRHVISYS RKVFVPLTRL CRDSCGYCTF AKTPRQVEAA FLSPDDVLAI VRAGQAAGCH
EALLTLGDKP EARYAAAREF LAAQGVATTV DYVEKICKLI LAETGLLPHV NAGVMSEAET
ARLRKVSVSQ GIMLESVSER LCARGEAHFG SPDKLPAVRL DAIAAAGRLR VPFTSGILIG
IGETRLERVQ SLLALRSLHR RYGHLQEIIV QNFRAKADTR FADRHEPGLE DLLWTAAVAR
LIFGPKMNIQ VPPNLSYADY PRLLEAGIND WGGISPVTAD HVNPEAPWPE IARLQQATEA
VGLTLQPRLA VYPAYVRHAA DWIDPALLPK VLKAVDADGF PRDDGWMPGG LAPIPPTGAA
RRSDPSLEAL VVRAAGGTRL SQPEVQALFG ARGGDVDMIC EAADAVRAAS SGETVRYVVN
RNINYTNVCS YACKFCAFSK GKTHDHLRGR PYDLSLEEVA RRAREAWDRG ATEVCMQGGI
NPHYTGKTYV DLLRAVKNEV PQMHVHAFSP LEVSQGAATL GMSVSNFLSM LRDEGLGSLP
GTAAEILDDK VRQVICADKL DTQIWLDIVR SAHRVGLRTT ATIMFGHVEG SDSWAAHLLR
IRDLQEQTGG FTEFVPLPFI HMEAPMSLRG QARSGPTWRE VRLMHAVARL VLYPLITNIQ
ASWVKLGEDG VASLLRSGVN DLGGTLMNES ISRAAGTQHG QELAPEAMEA LITRAGRVAE
QRTTLYRPVD AERRDASFAA PELQDLVMTP FVPKQMALAR
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