Gene RPB_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4402 
Symbol 
ID3912217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4988511 
End bp4988996 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID637886307 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_487999 
Protein GI86751503 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0721768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTA CCATTCGCGC GATGCGCAGC GAGGACGCGG TCGAAATCTT CGAGATCGTC 
AATCAGCGCG CGTTTCGCTT CTGGACGCTG TCTCTCCCCT ATGAATCGTT CGACACGATC
AAGAAGTGGC TCGAGCCGCA GTCACCGCGC GACCTGCATT TCTCGGCGGA ACTGGACGGT
CGTGTCGTCG GCGCGTCGGC GTTGCGCCCG TTCTACGGAC GCCGCGCCCA CGCCGCCGAG
TTCTGGATCG GCGTGCATGA AGACTACGCC CGACGCGGCA TCGGCACGCG ACTGCTCGCG
GCCATGATCG ACACCGCCGA CAATTGGCTG AACATCAAGC GGATCGAGAT GACGGTCTTC
ACCGACAATA TCGGCGCGCT GGCGCTGTAC AGCAATTTCG GCTTCGAGAT CGAAGGCACC
CACAAGGCGG CCACCTTCAG AGAAGGCGCG TTCGTCGACG CCCATTGCAT GGCGCGATTG
CGATGA
 
Protein sequence
MDVTIRAMRS EDAVEIFEIV NQRAFRFWTL SLPYESFDTI KKWLEPQSPR DLHFSAELDG 
RVVGASALRP FYGRRAHAAE FWIGVHEDYA RRGIGTRLLA AMIDTADNWL NIKRIEMTVF
TDNIGALALY SNFGFEIEGT HKAATFREGA FVDAHCMARL R