Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4402 |
Symbol | |
ID | 3912217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4988511 |
End bp | 4988996 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637886307 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_487999 |
Protein GI | 86751503 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0721768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTA CCATTCGCGC GATGCGCAGC GAGGACGCGG TCGAAATCTT CGAGATCGTC AATCAGCGCG CGTTTCGCTT CTGGACGCTG TCTCTCCCCT ATGAATCGTT CGACACGATC AAGAAGTGGC TCGAGCCGCA GTCACCGCGC GACCTGCATT TCTCGGCGGA ACTGGACGGT CGTGTCGTCG GCGCGTCGGC GTTGCGCCCG TTCTACGGAC GCCGCGCCCA CGCCGCCGAG TTCTGGATCG GCGTGCATGA AGACTACGCC CGACGCGGCA TCGGCACGCG ACTGCTCGCG GCCATGATCG ACACCGCCGA CAATTGGCTG AACATCAAGC GGATCGAGAT GACGGTCTTC ACCGACAATA TCGGCGCGCT GGCGCTGTAC AGCAATTTCG GCTTCGAGAT CGAAGGCACC CACAAGGCGG CCACCTTCAG AGAAGGCGCG TTCGTCGACG CCCATTGCAT GGCGCGATTG CGATGA
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Protein sequence | MDVTIRAMRS EDAVEIFEIV NQRAFRFWTL SLPYESFDTI KKWLEPQSPR DLHFSAELDG RVVGASALRP FYGRRAHAAE FWIGVHEDYA RRGIGTRLLA AMIDTADNWL NIKRIEMTVF TDNIGALALY SNFGFEIEGT HKAATFREGA FVDAHCMARL R
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