| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4401 |
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| Symbol | |
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| ID | 3912216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4986141 |
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| End bp | 4988411 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637886306 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_487998 |
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| Protein GI | 86751502 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.78723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0995472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAT TCGCAAGTGC TGCCGTGCTG AACTGCGGCG TATCGATGTT TGCAGTGGCG
CTTGCCGTTG CCGATGTGCC CGAAGCGCGG GCGCAGGCAA ACAACGCTTA CAGTTTCAAT
ATCCCGGCCA AATCGCGCCT CGCCGCGCTC GCGGACTTCA CCGCGGCGAC CGGGATCCAG
GTGGTGCATC AGGGGGCGGG GGCGATCGGC GGCACCTCCC CGGTGGTGAG CGGTCGCTAC
CCTGCCGATA CGGCGCTCCG GACGATTCTG GCCGGCTCCG GCCTCAACTA TCGCTTCACG
GGGCCGCGCA CCGTCGCGAT CGAGGCGCCG GGCGGCGCAG CGGGCGCGGG CGGCGCCGTG
GCCGGCAGCG GCATCGCGCT GGATACGATC AGCGTGACCG GCGCCGGACA AGGGATCGGC
CGCGACGGCG TCAGCGAGAT CAACATCACG AGCGTGGACA TCGAGCGTCG CAATGCGACC
GACGTCAAGG GCTTGTTCCG CGGCGAGCCG AGCATCCTGG TCGGCTCCTC GCTGCCGATG
TCGCAGAAGC TCTATGTGCA GGGCATCGAG GAAACCAATC TCGCGGTTTC GATCGACGGC
TCGCGGCAGA ACAACAAGGT GTTCCATCAC AACGCGACCA CGATGATCGA TCCGAGCCTG
CTCAAGGCGG TGCGGGTCGA TGCCGGCGTG GCGCCCGCCG ACGCCGGCCC CGGCGCACTC
GGCGGCGCGA TCGCCTATGT GACCAAGGAC GCGCGGGACT ACCTGCCCAA TGACGGCTTC
GGCGGCTCGA TCAAGTCGAC CTTCAACTTC AACGGCAACA CCTCGACCAA CAATCTCACC
AGCTACACGC GCCAGGGCGG CTTCGAAGCG CTCGGCTCCT TCACCTATGC CAAGGGGAGC
GAGTTCAAGG CCGGCAACGG CCAGGACGTG CTCGGCACCG CGACCAATTT CCTCAGCGGG
CTCGGCAAGA TCGCCTATCA GAGCCTCGAG GGCCACCGCT TCTCGCTGAG CCACGAGCAG
ATGCGCGACG ACGCCCTGCG GCCGTTCCGG GCCAATGCGG TGCAGATCAT CGGCGGCAAG
CCGACGCCGC TGGTGCGCCC CTACACGCTC GACCGGCAGA ACACCGTCTT CACCTACACC
AACGTCTCCC CCGACGGATG GTGGGACCCC AAATTCGTGC TGGGCTACAA TCGCTCGAAA
GCCGCGGTGG ACCAATACAC CGGCGCCACG CTCAGTACCT ACAGCTACAC CAGCCAGGGA
ATCAGCGACA GCCTCAACGG CAAGCTGGAA AACAAGTTCG CCTTCTCCAT CGGCGACGTC
GTCGCCGGCA TCGACTTCTA CCGGGACCGC GCCGAATACA TCGACGTGAG CTATCGGACG
ATGGAGAAGG CCGACAATAT CGGCGCCTAT GCCCAGGCGC GGCTGCGGCC GTGGGAACGC
ACCAAGCTCT CCTTCGGCAT GCGCGGAGAC CACCAGAATT TCAAAGGCGT CAACGGCTTC
AGCTCCAGCG ACCAGGGCTT AAGCGGGAAC GCTTCGGGCG AATACGAGCT GACCAGCTTC
CTCAGCGCCA AGGCCGGCTA TTCGCACGTC TGGGCCGGCG TGCCGCTCGC CGAGAATTAC
GTCCAGAACC CGGCGTGGAT CTACGGTGTC GGCCCGAAAT CGGTGACCTC CGACAACTAC
ACCGCCGGTC TCGTCGCTCA CTACGGGGAT TTCCGCTTCG AGGGCGGCGT GTTCCGCACC
CAGATCAACG ATGCCCGCGT GCCGCTGTGG GCCGCCAACC AGGCGCTGCG CGCCTTCGAC
GTACAGACGC AGGGCTTCCA CGTCGGCGGC ACCTACAACT GGGGCGACGG CTTCGCGCGG
GTGCGGTTCG CGCGCACCGA CGCCGAGATC GACGGCAAGC CGGCCGATAC TTATCTCGGC
CAGTACCTCA CGGCGCCGAT CGGCGACGTG CTGACCTTTC AGCTCGCGCA CACCGTCGTG
CCGTGGAATC TGACCTTCGG AGGCGACGTC GAGATCGTGT TCGACTACGA CAAGCTGCTG
AATCCCGTGA CCGGAATCGG CAAGCTCGAA GGCTACGAAG TCCTCAACGC CTTCGTCGAG
CATCGCCCGT TCGCGCTGCC GTCGCTGACG CTGCGCGGTG AAGTCAGAAA CCTGTTCAAC
AGGAACTACG CGGCCCGCGG CACCTACGGC CTCGAATACG GCACCGGCGT CGTGCGGCCT
CTGTACGAAC CCGGCCGCTC CGTGCTGGTC AGCGCCAAGC TCGACTTCTG A
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| Protein sequence | MRKFASAAVL NCGVSMFAVA LAVADVPEAR AQANNAYSFN IPAKSRLAAL ADFTAATGIQ
VVHQGAGAIG GTSPVVSGRY PADTALRTIL AGSGLNYRFT GPRTVAIEAP GGAAGAGGAV
AGSGIALDTI SVTGAGQGIG RDGVSEINIT SVDIERRNAT DVKGLFRGEP SILVGSSLPM
SQKLYVQGIE ETNLAVSIDG SRQNNKVFHH NATTMIDPSL LKAVRVDAGV APADAGPGAL
GGAIAYVTKD ARDYLPNDGF GGSIKSTFNF NGNTSTNNLT SYTRQGGFEA LGSFTYAKGS
EFKAGNGQDV LGTATNFLSG LGKIAYQSLE GHRFSLSHEQ MRDDALRPFR ANAVQIIGGK
PTPLVRPYTL DRQNTVFTYT NVSPDGWWDP KFVLGYNRSK AAVDQYTGAT LSTYSYTSQG
ISDSLNGKLE NKFAFSIGDV VAGIDFYRDR AEYIDVSYRT MEKADNIGAY AQARLRPWER
TKLSFGMRGD HQNFKGVNGF SSSDQGLSGN ASGEYELTSF LSAKAGYSHV WAGVPLAENY
VQNPAWIYGV GPKSVTSDNY TAGLVAHYGD FRFEGGVFRT QINDARVPLW AANQALRAFD
VQTQGFHVGG TYNWGDGFAR VRFARTDAEI DGKPADTYLG QYLTAPIGDV LTFQLAHTVV
PWNLTFGGDV EIVFDYDKLL NPVTGIGKLE GYEVLNAFVE HRPFALPSLT LRGEVRNLFN
RNYAARGTYG LEYGTGVVRP LYEPGRSVLV SAKLDF
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