Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4399 |
Symbol | |
ID | 3912214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4984098 |
End bp | 4984856 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637886304 |
Product | ABC transporter related |
Protein accession | YP_487996 |
Protein GI | 86751500 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4604] ABC-type enterochelin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.210595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCG TGAAGAACAT CTCGCTCGCC TACCAGGGCG CGAGGATCCT GCGGGACATC AATCTGGAGA TTCCCGAAAC CGGCGTCACC GCACTGATCG GCCCGAACGG TGCCGGAAAA TCCAGCCTGC TGTCGCTGAT CGCGCGGCTT CAGCCGATCC AGACCGGCTC GATCAGCGTC GACGGGCAGC CGATCGGGCA CACGCCGAGC CGCGTGCTGG CGCGCAGGCT GGCGATCCTG CGGCAGGATC CGGCGATCGC CAGCCGGCTC CGGGTGCGCG AGCTGGTGGC GTTCGGCCGC TTTCCGCACA ACAACGGCCG CGCCACGGAC GAGGACCGGG CGCTGACGCA GGCCGCGCTC GAACGCTTCG ACCTGACCCG CTTCGCCGAC CGCTTCATCG ACACGCTGTC GGGCGGGCAA CGGCAGCTGG TGCTGGTGGC GATGACGTTC TGCCAGGGCA CGCGATGGCT GCTGCTCGAC GAACCGCTCA ACAATCTCGA CATGTTCTAT GCCCGCGAAC TGATGCGCTC CTTGCGGGAC GTCGCCGACA GCGAACGCCG CGCGATCGTG ATCGTGCTCC ACGACATCAA TCAGGCCGTG ACCTATGCGG ACCACATCGT CGCGATGAAA GGCGGCGCCG TGATCGCGCA GGGCCCGCCA GGCCAGATCG CGAATACCGC AAGCCTGCGG CAGATCTTCG GCTATGACAT GCCGGTCGAA ACCTATCGCG GGAAACCGAT TGTGCTGAAT CACCTGTAG
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Protein sequence | MIVVKNISLA YQGARILRDI NLEIPETGVT ALIGPNGAGK SSLLSLIARL QPIQTGSISV DGQPIGHTPS RVLARRLAIL RQDPAIASRL RVRELVAFGR FPHNNGRATD EDRALTQAAL ERFDLTRFAD RFIDTLSGGQ RQLVLVAMTF CQGTRWLLLD EPLNNLDMFY ARELMRSLRD VADSERRAIV IVLHDINQAV TYADHIVAMK GGAVIAQGPP GQIANTASLR QIFGYDMPVE TYRGKPIVLN HL
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