Gene RPB_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4399 
Symbol 
ID3912214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4984098 
End bp4984856 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID637886304 
ProductABC transporter related 
Protein accessionYP_487996 
Protein GI86751500 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4604] ABC-type enterochelin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.210595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG TGAAGAACAT CTCGCTCGCC TACCAGGGCG CGAGGATCCT GCGGGACATC 
AATCTGGAGA TTCCCGAAAC CGGCGTCACC GCACTGATCG GCCCGAACGG TGCCGGAAAA
TCCAGCCTGC TGTCGCTGAT CGCGCGGCTT CAGCCGATCC AGACCGGCTC GATCAGCGTC
GACGGGCAGC CGATCGGGCA CACGCCGAGC CGCGTGCTGG CGCGCAGGCT GGCGATCCTG
CGGCAGGATC CGGCGATCGC CAGCCGGCTC CGGGTGCGCG AGCTGGTGGC GTTCGGCCGC
TTTCCGCACA ACAACGGCCG CGCCACGGAC GAGGACCGGG CGCTGACGCA GGCCGCGCTC
GAACGCTTCG ACCTGACCCG CTTCGCCGAC CGCTTCATCG ACACGCTGTC GGGCGGGCAA
CGGCAGCTGG TGCTGGTGGC GATGACGTTC TGCCAGGGCA CGCGATGGCT GCTGCTCGAC
GAACCGCTCA ACAATCTCGA CATGTTCTAT GCCCGCGAAC TGATGCGCTC CTTGCGGGAC
GTCGCCGACA GCGAACGCCG CGCGATCGTG ATCGTGCTCC ACGACATCAA TCAGGCCGTG
ACCTATGCGG ACCACATCGT CGCGATGAAA GGCGGCGCCG TGATCGCGCA GGGCCCGCCA
GGCCAGATCG CGAATACCGC AAGCCTGCGG CAGATCTTCG GCTATGACAT GCCGGTCGAA
ACCTATCGCG GGAAACCGAT TGTGCTGAAT CACCTGTAG
 
Protein sequence
MIVVKNISLA YQGARILRDI NLEIPETGVT ALIGPNGAGK SSLLSLIARL QPIQTGSISV 
DGQPIGHTPS RVLARRLAIL RQDPAIASRL RVRELVAFGR FPHNNGRATD EDRALTQAAL
ERFDLTRFAD RFIDTLSGGQ RQLVLVAMTF CQGTRWLLLD EPLNNLDMFY ARELMRSLRD
VADSERRAIV IVLHDINQAV TYADHIVAMK GGAVIAQGPP GQIANTASLR QIFGYDMPVE
TYRGKPIVLN HL