| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4356 |
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| Symbol | |
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| ID | 3912170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4938758 |
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| End bp | 4940464 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637886261 |
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| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_487954 |
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| Protein GI | 86751458 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCT ATGAGTTCGA CGGAACCGAC CTCGACGGCG GCGAGCGGGT CTATCCGCGC
TATGACCAGA CGTTTCCGGT ACTGACGCCG GCCGAAATCG AACGGATGCG CCGTTTCGGC
GAGATCCGGC GCTTCGCCGA TGGCGAGATG CTGTTCGAAA CCGGCAAGAT CGGCCCCGGC
ATGTTCGTGG TGCTGTCGGG CCATGTGGCG GTCACTCAGC GCGACGGCCT CGGCCATGTC
ACCCCTGTGG TCGAGCAGGG CCCGGGGCAA TTCCTCGCCG AAATCAGCCA GTTGGCCGGC
CGGGTCGCGC TGGTCGACGG CCGCGCCGAC GGTGACGTCG AATGTCTGCT GATTCCGCCG
GAGCGGCTGC GCGCGCTGCT GGTGGCCGAG GCCGATCTCG GCGAGCGCAT CATGCGGGCG
CTGATCCTGC GCCGCGTCAA TCTGATCCAG GGTGGCGTCG GCGGACCGGT GTTGATCGGC
TCGGCGACGT CGTCGGATGC GGTGCGGCTG ATGGGCTTCC TGACCCGCAA CGGCTGGCCG
TTTCATCTGC TCGACCCTGC GACCGACCGC GACGCTGCCG ATCTGGTGAC GCGTTTTTCG
CCGGGGCCGC ACGACCTGCC GCTGGTCGTC GCCTCCGATG GTACGGTGCT GCGCAATCCG
CGGGAAGCCG ACCTCGCCCG TGCCATGGGC ATGATCGGCA AGCTCGACCC CGCCAAGGTC
TACGACGTCG CGATCGTCGG CTCCGGTCCT GCGGGCTTGT CGACCGCGGT GTATGCGGCG
TCGGAGGGCC TGTCGGTCGC GGTCTGCGAT CAGCGTGCGT TCGGTGGGCA GGCCGGTGCC
AGCGCCCGGA TCGAGAACTA TCTCGGATTC CCGACCGGCA TTTCCGGCCA CGCGCTGACG
GCCCGGGCCT TCAATCAGGC GCAGAAATTC GGCGCGGACA TCATGATCCC GGTCGAGGTC
AAGTCGCTCG AATGCGGCAG CAACGACGGC ACCTTCGCGC TGTCGCTGGA CGACGGCGCA
GCGCTGCGCG CCCGTGCGAT CGTCGTCGCC AGCGGCGCGC GCTATCGCCG GCCCGAGATC
GCCAACCTCG CCGCGTACGA CGGTCGCGGG GTGTACTATT GGGCGTCGCC GATCGAGGCG
CGGCTGTGCA AGGATCAGGA GGTCATCCTC GTCGGTGGTG GCAACAGCGC CGGCCAGGCC
GCGGTGTATC TGTCGACGCA TGCGGCGCGC GTCCACATGG TGATCCGCGG CGGCGGGCTC
GCCGCCAGCA TGTCGCGCTA TCTGATCGAG CGGATCGAAT CGACGGCGAA TATCGAACTG
GTGTTCAACA CCGAGGTCGC CTCGGTGGAC GGATCGCCCG ATGGCGGCCT GGAGCGGGTG
TCGTTGCGCA GCCGGCTGTC CGGTGATGAT TGGACGATGG ACGTGCGCAA TCTGTTCCTG
TTCGTCGGCG CCGACCCGGC CACCGGCTGG CTCCATGGCT GTGGCGTCAC GCTCGACCGG
GCCGGTTTCG TGGTCACCGG GGCGCCCGCC GAAGACGACC GCCAGCGGCC GGCGCAGGCG
CTCGAAACCT CGGTGCCGGG CGTGTTCGCC GTCGGCGACG TGCGCTCGGG CTCGGTCAAG
CGCGTCGGTG GTGCGATCGG CGAGGGCGCG CAGGTGGTGG CCGCGCTGCA CGGCTTTCTC
GCGGATTCGC TGCAGCCGGT GAAGTAG
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| Protein sequence | MTGYEFDGTD LDGGERVYPR YDQTFPVLTP AEIERMRRFG EIRRFADGEM LFETGKIGPG
MFVVLSGHVA VTQRDGLGHV TPVVEQGPGQ FLAEISQLAG RVALVDGRAD GDVECLLIPP
ERLRALLVAE ADLGERIMRA LILRRVNLIQ GGVGGPVLIG SATSSDAVRL MGFLTRNGWP
FHLLDPATDR DAADLVTRFS PGPHDLPLVV ASDGTVLRNP READLARAMG MIGKLDPAKV
YDVAIVGSGP AGLSTAVYAA SEGLSVAVCD QRAFGGQAGA SARIENYLGF PTGISGHALT
ARAFNQAQKF GADIMIPVEV KSLECGSNDG TFALSLDDGA ALRARAIVVA SGARYRRPEI
ANLAAYDGRG VYYWASPIEA RLCKDQEVIL VGGGNSAGQA AVYLSTHAAR VHMVIRGGGL
AASMSRYLIE RIESTANIEL VFNTEVASVD GSPDGGLERV SLRSRLSGDD WTMDVRNLFL
FVGADPATGW LHGCGVTLDR AGFVVTGAPA EDDRQRPAQA LETSVPGVFA VGDVRSGSVK
RVGGAIGEGA QVVAALHGFL ADSLQPVK
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