Gene RPB_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4342 
Symbol 
ID3912155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4926871 
End bp4928130 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content67% 
IMG OID637886246 
Productadenosylmethionine--8-amino-7-oxononanoate transaminase 
Protein accessionYP_487940 
Protein GI86751444 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0542572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA CTTCGCCGGT CTGGCATCCC TTCACTCAGC ACGCGGTGCA GCCCGAGGCG 
ACGTTGATCG CCAAAGGCGA GGGCGCCTGG CTCGAGACCG CCGACGGCCG CCGGATCTAC
GACGCGATCT CGTCCTGGTG GGTGGTGACC CACGGCCATC GTCATCCGCG GATCGTTCAG
GCGATCAAGG ATCAGGCCGA CCGTCTCGAT CAGGTGATCT TCGCCGGCTT CACCCACGAG
CCGGCCGAGC AGCTCGCGCG GCGGCTGGTC GCGATCACGC CGCCCGGGCT CGACTACGTG
TTCTTCTCCG ACAGCGGCTC GACCGCGGTC GAAGTCGGGT TGAAGATGGC GCTGGGCTTC
TGGCGCAATC GCGGCGAGAG CCGCAGTCGC ATCCTGGCGC TGCAGGGCGC TTACCACGGC
GACACCATCG GCGGCATGTC GGTCGGCGAA CGCGGCGTCT TCAACGCGCC CTACGATCCG
CTGCTGTTCG AGGTCGACCG GCTGCCGTAT CCGGCGGAAG GTCGCGCGCA GGCGACGCTC
GATGCGCTGG AGAGGTCATG CCGCGCCGGC GGCGTCGCAG CATTGATCGT CGAGCCGCTG
GTGCTCGGCG CCGGCGGCAT GCTGATCTAT CCGCCTTCGG TGCTGGCGGA GATGAAGCGG
ATCTGCGCCA GCCACGGCGT GCTGCTGATC GCCGACGAAG TGATGACCGG CTGGGGCCGC
ACCGGCACGC TGTTCGCCTG CGAACAAGCC GGCGTCGTAC CGGACATCGC CTGCTACTCC
AAGGGCCTCA CCGGCGGCTC GGTGCCGCTG GCGGTGACGC TGTGCAGCGC CGAGATTTTC
GACGCGCACT ACTCGACCGA TCGGACCAAG ACGTTCTTTC ACTCCAGCTC GTACACCGCC
AATCCGATCG CCTGCGCGGC GGCGGTGGCC AATCTAGAGA TCTGGGACGA AGAGCCGGTG
CGCGAGCGCA TCGCGCGACT GGGCGCATGG CACGCGACCA GGCTCGACCG CTTCCGCGAC
GATTCGCGGT TCGCCAATAT CCGCCAGATC GGCACTATCG CGGCGCTCGA TGTCGTCGCC
GGCGACGCCG GCTACATGGC GAATATCGGC CCGTATCTGT ACGAGAGTTT CCGCGCGCGT
GGACTGCTGG TCCGACCGCT CGGCAACACG ATCTATCTGA TGCCGCCTTA TTGCAGCACG
GAAGCCGATC TCGATCTGGT CTACGACGCG ATCGGCGAAA TCGTGGATGG GATCGGCTGA
 
Protein sequence
MTSTSPVWHP FTQHAVQPEA TLIAKGEGAW LETADGRRIY DAISSWWVVT HGHRHPRIVQ 
AIKDQADRLD QVIFAGFTHE PAEQLARRLV AITPPGLDYV FFSDSGSTAV EVGLKMALGF
WRNRGESRSR ILALQGAYHG DTIGGMSVGE RGVFNAPYDP LLFEVDRLPY PAEGRAQATL
DALERSCRAG GVAALIVEPL VLGAGGMLIY PPSVLAEMKR ICASHGVLLI ADEVMTGWGR
TGTLFACEQA GVVPDIACYS KGLTGGSVPL AVTLCSAEIF DAHYSTDRTK TFFHSSSYTA
NPIACAAAVA NLEIWDEEPV RERIARLGAW HATRLDRFRD DSRFANIRQI GTIAALDVVA
GDAGYMANIG PYLYESFRAR GLLVRPLGNT IYLMPPYCST EADLDLVYDA IGEIVDGIG