Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4331 |
Symbol | |
ID | 3912144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4915232 |
End bp | 4916179 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637886235 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_487929 |
Protein GI | 86751433 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0888724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCA GATTTTTGGG TTTCGCCGCG GCTGCGGCCG TGCTCGTTTC GGCGCCGCAG GCTCACGCCC AGCAGTTCGT CAACGTGCTG ACCGGCGGCA CGTCCGGCGT GTATTATCCG CTCGGCGTCG CGATCGCGAA GATCTACGGC GACAAGATTC CGAACGTGAA GTCGCAGGTG CAGGCCACCA AGGCGTCGGT CGAGAACCTC AATTTGCTGC AGCAGGGCCG CGGCGAGATC GCCTTCACGC TCGGCGACTC GCTGAAAGCG GCGTGGGACG GCGATCCTGA GGCCGGCTTC AAGGCCAAGC TCGACAAGCT GCGCGTGATC GGCGCGATCT ATCCGAACTA CATCCAGATC GTCGCCACCG CGGAGTCGGG GATCAAGACG CTCGCCGACC TCAAGGGCAA GAGCCTGTCG GTCGGCGCGC CGAAATCCGG CACCGAGCTG AATTCCCGCG CCATCCTCAA GGCCGCCGGG ATGGATTACA AGGACATGGG CAAGATCGAA TATCTGCCGT TCGCCGAATC CGTCGACCTG ATGAAGAACC GCCAGCTCGC CGCCACGCTG CAATCCGCAG GCCTCGGCGT CGCCTCGCTC AAGGATCTCA GCAACTCCTC CGAGATCAAC GTGGTCTCGG TGCCGAAGGA CGTGGTCGAC AAGATCGGCC CGCCGTTCGT CGCCGAAACG ATCCCGGCCG GCACCTACAA GGGCCAGGAC AAGGACGTTC CGACCGCGGC GGTGATCAAC TATCTCGTCA CTTCGACCGC GGTGTCCGAC GATCTCGCCT ATCAGATGAC CAAGCTGGTG TTCGACTCGC TGCCGGACCT CGCCAGCGCC CACGCCGCCG GCAAGGGCAT CAAGCTCGAG ACCGCCGCGG CCGGCAGCCC GGTTCCGCTG CACCCCGGCG CGATCAAGTA CTTCAAGGAA AAGGGCGTGC TGAAGTAA
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Protein sequence | MKARFLGFAA AAAVLVSAPQ AHAQQFVNVL TGGTSGVYYP LGVAIAKIYG DKIPNVKSQV QATKASVENL NLLQQGRGEI AFTLGDSLKA AWDGDPEAGF KAKLDKLRVI GAIYPNYIQI VATAESGIKT LADLKGKSLS VGAPKSGTEL NSRAILKAAG MDYKDMGKIE YLPFAESVDL MKNRQLAATL QSAGLGVASL KDLSNSSEIN VVSVPKDVVD KIGPPFVAET IPAGTYKGQD KDVPTAAVIN YLVTSTAVSD DLAYQMTKLV FDSLPDLASA HAAGKGIKLE TAAAGSPVPL HPGAIKYFKE KGVLK
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