Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4308 |
Symbol | |
ID | 3912121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4893035 |
End bp | 4893559 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886212 |
Product | hypothetical protein |
Protein accession | YP_487906 |
Protein GI | 86751410 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.219797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCCGT CCTTCCTCGA CAAGGCCTGG TCGCCCTACG TCGCCGGCGT GGTGATCGGA CTGCTGCAGA TCCCGGCGTT TCTGATGATC CAGACCGCGC TCGGCGCCTC GTCGTCGTTC GTCACCGTCG GTGACGCGCT GGCGAGCTGG ATCGATCCCT CGCTGCTGCA GATCAAATAC GCCGCCAGTC ATGTCGCGCC GACGGCCAAG AACCTCTGGC AGGTCGCGCT GGTCGGCGGC ATCGCGATCG GTGCCTTCCT GTCGATGAAA CTATCCGGCG CCCGGCGCCA GCCGATCTCG CCGATCTGGA GCCGCGCGCT CGGCTCCTCC TCCGCCACGT TGCGCTACGC AGTCGCCTTC GTCGCCGGCT TCCTGATGCT GTTCGGCGCG CGGATCGCCG ACGGCTGCAC CAGCGGCCAC GGCGTCTCCG GCGTCGCGCA ATTGTCGGTC GGCTCCACCG TCGCGGTCGC CGCGATGTTC GTCGGCGGCA TCGTCACGGC GACGCTGCTG CTGCGTCGCA TCTGA
|
Protein sequence | MMPSFLDKAW SPYVAGVVIG LLQIPAFLMI QTALGASSSF VTVGDALASW IDPSLLQIKY AASHVAPTAK NLWQVALVGG IAIGAFLSMK LSGARRQPIS PIWSRALGSS SATLRYAVAF VAGFLMLFGA RIADGCTSGH GVSGVAQLSV GSTVAVAAMF VGGIVTATLL LRRI
|
| |