| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4272 |
|---|
| Symbol | ruvC |
|---|
| ID | 3912085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4855962 |
|---|
| End bp | 4856558 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886177 |
|---|
| Product | Holliday junction resolvase |
|---|
| Protein accession | YP_487871 |
|---|
| Protein GI | 86751375 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0821163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGGGG ATGATCCCGT CGTCCAAACC GTTTCTGTTT CGTTCACGTC TATCTGGCGT
TATCACTGCG CCATGAGCCT TCCGCCGATT CGCACCGCTG TCCGCATCCT GGGGATCGAC
CCCGGCCTTC GCCGCACCGG CTGGGGCGTG GTCGAGAGCG ACGGCAATCG GCTGGTGTTC
GTGGCCTGCG GCTCGGTCGA ACCGAAGGAC ACGTTGACGC TGGCGGAGCG GCTGCTGGCG
ATCCATCATG GGCTCGAGAA GGTGCTGGCC GAGTTCGCGC CGGCGGAGGC CGCGGTCGAG
CAGACCTTCG TCAACAAGGA CGGCGCCGCC ACGCTGAAGC TCGGCCAGGC GCGGGGCGTG
GCGATGCTGG CGCCGGCGAT GCACGGCATT CTGGTCGCCG AATACGCGCC CAACCAGGTC
AAGAAGACGG TGGTCGGCGC CGGCCATGCC GACAAGGTCC AGATCCAGAT GATGCTGAAG
ATATTGCTGC CCAAGGCCGA TCCGCGCACC GCGGACGCCG CCGACGCCCT CGCCATCGCC
ATCACCCACG CCCACCACCG CGTCGCCGCG CAGCGGCTGA GGGCGGTGGG GGGATGA
|
|---|
| Protein sequence | MGGDDPVVQT VSVSFTSIWR YHCAMSLPPI RTAVRILGID PGLRRTGWGV VESDGNRLVF
VACGSVEPKD TLTLAERLLA IHHGLEKVLA EFAPAEAAVE QTFVNKDGAA TLKLGQARGV
AMLAPAMHGI LVAEYAPNQV KKTVVGAGHA DKVQIQMMLK ILLPKADPRT ADAADALAIA
ITHAHHRVAA QRLRAVGG
|
|---|
| |