Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4258 |
Symbol | |
ID | 3912071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4844127 |
End bp | 4844429 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637886163 |
Product | excinuclease ABC subunit C |
Protein accession | YP_487857 |
Protein GI | 86751361 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00754458 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCT ACGTCTACAT GCTGCACTGT TCGGACGGCT CGTACTACGT CGGCAGCGCG ACGGGGGATG ATCTGTCCGC GCGGATCGAT CAGCACAATG CCGGCGCCTT CCCCGGCTAC ACGTTCGTCC GTCGACCGGT CACACTGGTC TGGTCGCAGC ATTTCGACCG CATCACCGAC GGCATCGCCG CCGAGCGGCA GATCAAAGGC TGGGGTCGGG CCAAGAAGGA AGCGCTGGCA AGGTCCGATT GGGACGGCGT GCAGCAATTG GCGCGTCGCC GCGGCGGCAA GCCAGCGCGG TGA
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Protein sequence | MGIYVYMLHC SDGSYYVGSA TGDDLSARID QHNAGAFPGY TFVRRPVTLV WSQHFDRITD GIAAERQIKG WGRAKKEALA RSDWDGVQQL ARRRGGKPAR
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