| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4245 |
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| Symbol | |
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| ID | 3912058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4826867 |
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| End bp | 4828909 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886150 |
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| Product | peptidase M23B |
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| Protein accession | YP_487844 |
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| Protein GI | 86751348 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.442759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCACGGG GACGCAGCCA CGGGCGCGAG GTCGGTTTCA TCGACCTCGG CCACGAGCCC
CCGCTTTCCG TCGATGGCAC TGAAGCCGCG GTGATCGATC GCCGTCGCGT CTCGGTCCAA
TGGTTCAGCG GCACGATTCT GACCGGCCTG TGCGGCGCAG CCTTGATCGG CGGCGCCGTT
TTCGCGTCGC TCGACGGCGA AATGACCTTC GCCAAGGCGC CCGAGCGGGT CGAGGCCGCG
CTGCGCGGCG CCTTCGGCGC CGACAAGAAC GCCGCCCTGC ACAAGAGCGA CCGCCTGCCC
CCGCCCAGCG AATCGCAGGC CGCGCGCAAC GTGATCCGGG TCTCCTCGGT CTCGCGCGTC
GGCAATCGCG ACGTCGTCCG GGTGCGGCCC TACATCAAGA TCGCCGGCAA TCTGTCGCTG
TCGACCACCG AACTGTCGGC CAAGATCCCG CCGTTCAACG CCCAGCGGAT GCTCAGCGAC
GTCGGCGCCG CGGCGCCGGC GGCGGAAGAC GCGCAGAATC CCGACGCCGT CGAGCCCGAC
GCCGAAGTCT CGTTCATCAC CCGCGATCTC GGCCAGGTGC TGCCGCGGGC GAAGATCGCA
GGCTTCATCC CGCCCGACGA AATCCTGATG CGGGTGCGCG ACGCGGCGAA CTGGAAGGGC
AATAGCGGCG TGCGCTACGC CAGCGCCACC GCCGGGGATA TCGGCGGCGG CGGCGGCGAT
ATGCGGCTCG GCTACGCGCC CGAAGGCGCC TCCGCCGACC CCTATGCGGG TTTCGAGACC
CGCATCGTGC CGGAAAACGT CACGCTGCTG CCGAAGACCA AGGAGCAGGT GACCGGCGGC
AATGCCTCCG GCGAGCGCGT CCACATCGTC AAGAAGGGCG ACACCGTCGT TTCGGTGCTG
CGCGACCAGG GCGCCAGCGA GCTGGACGCC AATGCGGTGG CCCAAGCGCT CGGCGCGCGC
GGCCGCAACG GCGGGCTGAA GGAAGGCCAG AAGCTGCGGA TCCTGATGGA GCCCTCCGGC
GCCGCCAAGC AGCCGCAGCC GTTCCGGGTG ATCATCGCCA ACGATTCGGC GGTCGAAGCG
GTGGCGGCCT TGTCCGATCT CGGCCGCTAC GTCGCGGTCG ACGTCCAGGC CCTCAACACC
GTCAGCGACA CCGCCGACAA CAGCGACGAG GACGAGGACG ACGGCACCGG CGTGCGGCTG
TATCAGTCGA TCTACGAGAC CGCGATGCGC AACAAGGTGC CGCAGGCGAT CATCGACGAC
ATGATCAAGA TCTACTCCTA CGACGTCGAT TTCCAGCGCA AGGTGCAGGC CGGCGACTCG
TTCGAGGTGT TCTACGCCGG CGACGACGAG ACCACCACAA CGGTCGAGAA GAACGACGTG
CTGTTCGCCG CGCTCACCGT CGGCGGCGAA ACCAAGAAAT ACTACCGCTT CCAGACCCCC
GACGATTCGG TGGTGGATTT CTACGACGAG AGCGGCAAGA GCGCGAAGAA GTTCCTGGTG
CGCAAGCCGG TCAACAACGC GATCATGCGC TCCGGCTTCG GCGGCCGCCG CCATCCGATC
CTCGGCTACG TCAAGATGCA CACCGGCGTC GACTGGTCGA CGCCCTACGG CACCCCGATT
TTTGCCTCCG GCAACGGCGT GATCGAAAAG GCCGGCTGGG AAGGCGGCTA CGGCAAATAC
ATCCGGATCA AGCACAACAA CGGCTACGAG ACCGCCTACG GCCACATGTC GGCCTTCGCC
AAGGGCATGG AGCCCGGCAA GCGGGTCCGC CAGGGCCAGG TGATCGGCTT CGTCGGCTCC
ACCGGCCTCT CCACCGGCGC GCATGTGCAT TACGAAATTC TCGTCAACGG CCGCTTCGTC
GACCCGATGC GGGTGAAACT GCCGCGCGGC CGCTCGCTCG AAGGCCCGCT GCTGGCGTCC
TTCGAGAAAG AGCGCGACCG CCTCGACGCC ATGCTGACCG GCCGCGGCGC CGGCCGCTTC
GCCGAAGACC TCACCGCAGC CACCCCGGTG CGCAGCGTCA ACGCGGCGGC GGCGCGGAAG
TAA
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| Protein sequence | MSRGRSHGRE VGFIDLGHEP PLSVDGTEAA VIDRRRVSVQ WFSGTILTGL CGAALIGGAV
FASLDGEMTF AKAPERVEAA LRGAFGADKN AALHKSDRLP PPSESQAARN VIRVSSVSRV
GNRDVVRVRP YIKIAGNLSL STTELSAKIP PFNAQRMLSD VGAAAPAAED AQNPDAVEPD
AEVSFITRDL GQVLPRAKIA GFIPPDEILM RVRDAANWKG NSGVRYASAT AGDIGGGGGD
MRLGYAPEGA SADPYAGFET RIVPENVTLL PKTKEQVTGG NASGERVHIV KKGDTVVSVL
RDQGASELDA NAVAQALGAR GRNGGLKEGQ KLRILMEPSG AAKQPQPFRV IIANDSAVEA
VAALSDLGRY VAVDVQALNT VSDTADNSDE DEDDGTGVRL YQSIYETAMR NKVPQAIIDD
MIKIYSYDVD FQRKVQAGDS FEVFYAGDDE TTTTVEKNDV LFAALTVGGE TKKYYRFQTP
DDSVVDFYDE SGKSAKKFLV RKPVNNAIMR SGFGGRRHPI LGYVKMHTGV DWSTPYGTPI
FASGNGVIEK AGWEGGYGKY IRIKHNNGYE TAYGHMSAFA KGMEPGKRVR QGQVIGFVGS
TGLSTGAHVH YEILVNGRFV DPMRVKLPRG RSLEGPLLAS FEKERDRLDA MLTGRGAGRF
AEDLTAATPV RSVNAAAARK
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