Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4238 |
Symbol | |
ID | 3912046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4814010 |
End bp | 4815203 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637886141 |
Product | PepSY-associated TM helix |
Protein accession | YP_487840 |
Protein GI | 86751344 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.593429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAGGT CGTCCGCGAT CAAACCGGCG CTGCTGCAAC TGCATTCGAT CGCCGGCCTG ATCCTGTCGC TGTTCCTCGC CGTGATCGCG CTGAGCGGCG CGGTGCTGAG TTTCGAGGAC GAGATCCAGG CCGCGCTGAA TGCCGATCGC ACAACGGTCG AGCTCCGCGC GACGCCGCGG CTGCAGCCCG ACGAATTGAT CGCCCGGCTG CAGGCCGCCA CCGGCGCCGG CAAGATCGCC TCGCTCACGC TGGCGCGCGA TCCGGCGGCG GCGGTTCACA TCCGCTTCGC GCGCAATGAC GACGCCTCGC GGCCGTCGTC GCTCTATGTC GATCCCTATG ACGCCCGCGT GCTCGGCCAT CCGGTCGGCG AGGGCTTCTT CGCCACGGTG CGCAAGCTGC ATCGCTGGCT GCTGCTGCCG GGCGATGCCA AGGGTTGGGG CCGGCCGATC GGCGGCATCG TCGCAATGGG CCTGATCGCG ATGCTGATCA CCGGGCTGGT GCTGCGCTGG CCGCATCGCG CCGGCAGCGT GAAGGTCTGG CTGAAGCCGA ATTGGCGGCT GCGCGGCCGC GGCCTGCACC GCTCGTTGCA CGCGGTGATC GGCACTTGGG CGATGCTGAT CTATCTGGTG ATGGTGCTGA CCGGATTGTG GTGGTCGTTC GACTGGTACA GAGACGGCGC AATCTGGCTT TTGTCCAGCG CGCCCCCGCG CGCCGAACCG ATGCAGCCAG CGCCGAAGCG CATGGCCGCC GCATCCGACA AGTCCGACAG CAAGCGCGAG GCTGCATCGG CGCTGCCGCT CGATCGTGTG TGGTCGGCCT TCCTGCAGCA GCAGGGCGAG CGCTTCGTCA CCGCGCGCCT GACGCCGCCG GCCGGCGGCG GCACGCTGGT GCGCGTCCGA TCCTGGAGCG CCGCCGCCGA CGGCGTCCGC GACGAATTCC GCATCGATGC CGCGAGCGGC AAGATCGTCT CCGCCGACCT CTACGCCGCC AAGCCGCTCG GCGACCGCAT CCTCGCCCGC GTGCTCGACA TCCACCGCGG CGCGATCCTC GGCTGGCCGG GCAAGCTGCT GTTCATGCTC GCCGCGCTTG CAATGCCGCT GTTCGTGATC ACCGGATTGC TGCTGTATCT GTCACGCCGA CGCCACAACC GCCTCACGCG CGCGCCGGTC GGAGAACTGG CGGCAGGAAA ATAG
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Protein sequence | MARSSAIKPA LLQLHSIAGL ILSLFLAVIA LSGAVLSFED EIQAALNADR TTVELRATPR LQPDELIARL QAATGAGKIA SLTLARDPAA AVHIRFARND DASRPSSLYV DPYDARVLGH PVGEGFFATV RKLHRWLLLP GDAKGWGRPI GGIVAMGLIA MLITGLVLRW PHRAGSVKVW LKPNWRLRGR GLHRSLHAVI GTWAMLIYLV MVLTGLWWSF DWYRDGAIWL LSSAPPRAEP MQPAPKRMAA ASDKSDSKRE AASALPLDRV WSAFLQQQGE RFVTARLTPP AGGGTLVRVR SWSAAADGVR DEFRIDAASG KIVSADLYAA KPLGDRILAR VLDIHRGAIL GWPGKLLFML AALAMPLFVI TGLLLYLSRR RHNRLTRAPV GELAAGK
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