Gene RPB_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4115 
Symbol 
ID3911923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4686412 
End bp4687050 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID637886019 
Productphosphatidylethanolamine N-methyltransferase 
Protein accessionYP_487718 
Protein GI86751222 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG ATATCGACCG CGCGGGCGTC GCCAAGGCGT ATGCGCGCTG GGCGCCGATC 
TACGACATGG TGTTCGGCAA AGTGTTCGAC AGCGGCCGGC AATCGACCAT CGCGGTGGCG
GATGCGATCG GTGGCCGCGT GCTCGACGTC GGCGTCGGCA CCGGACTGTC GCTGTCGGAT
TATTCGCCGA GCACCAAGCT GTGCGGCGTC GACATTTCCG AGCCGATGCT GCGCCGGGCG
CACGAGCGCG TCCGCACGCT GAACCTCACC AATGTCGAGA CGCTCGCGGT GATGGACGCC
AAGAATCTGG CGTTCCCGGA TAACTTCTTC GATGCGGTCG TGGCGCAATA CGTCATCACC
GCCGTCCCCG ACCCGGAAGC GACGCTCGAC GATTTCATTC GCGTGCTGAA GCCCGGCGGC
GAACTGATTC TCGTCAACCA CATCGGCGCC GAGAGCGGTC CGCGCAAGCT GTTCGAACTG
GCGTTCGCGC CGCTGGCGCG CCGGCTCGGC TGGCGCCCCG AATTCCCGTG GGCGCGGCTG
GTGAACTGGG CCGCGCGGCA CGGCGGCGTG GAACTGGCCG AACGGCGGCC GATGCCCCCG
ATGGGTCATT TCTCGCTGAT CCGTTATCGC AAGCTCTGA
 
Protein sequence
MANDIDRAGV AKAYARWAPI YDMVFGKVFD SGRQSTIAVA DAIGGRVLDV GVGTGLSLSD 
YSPSTKLCGV DISEPMLRRA HERVRTLNLT NVETLAVMDA KNLAFPDNFF DAVVAQYVIT
AVPDPEATLD DFIRVLKPGG ELILVNHIGA ESGPRKLFEL AFAPLARRLG WRPEFPWARL
VNWAARHGGV ELAERRPMPP MGHFSLIRYR KL