| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4103 |
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| Symbol | |
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| ID | 3911910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4672497 |
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| End bp | 4673702 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637886007 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_487707 |
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| Protein GI | 86751211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.742112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0857946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGATGGCAGC GGCGTGCGCC GCCGCGTGCA TCGTCGCGTC CGCGCCTGCG
TATGCCGGGA ATTACGGACC GGGCGTGACC GACACCGAGG TGAAGATCGG GCAGACCATG
CCGTATAGCG GCCCGGCCTC GAGCTTCGCC GCGATCGGGC GCGCGATGAC GGCGTATTTC
GAGAAGCTGA ATGCCGAGGG CGGTGTCAAC GGCCGCAAGA TCAACCTGGT CTCGCTCGAC
GACGGCTACA GTCCGTCGAA GGCGGTGGAG CAGACCCGCC GGCTAGTGGA GAGCGACGAG
GTGCTGGCGA TCGTCGGCAC CTTCGGTTCG CCGACCAATT TTGCGATTCA GAAATATCTC
AACACCAGGA AGGTGCCGGG TCTGTTCCTC GGCACCGGGG CGAACCGCGT CTCCGAGCCG
CAGACCTATC CGTGGTCGAT GGGCTGGCAG CCGAACAACC ACGCCAAGGG CGTGATCTAC
GCCAAATATC TTCTCAAGGA ACGCCCCAAC GCCAAGGTCG CGGTGCTGTA TCAGAACGAC
GATTTCGGCC GCGACTATGC CAAGGGCTTT CGCGACGGGC TCGGCGACAA GGCCGGCAGC
ATGATCGTCA AGGAGCTCAG CTACGAGATC ACCGAGCCGA CGGTCGACTC CCAGATCTTG
CTGTTGAAGT CGACCGGTGC CGATGTGTTC CTGAACATCT CGACGCCGAA GTTCTCCGCG
CAGGCGATCA AAAAGATGAC CGAGACCAAG TGGGAGGCGC TGCACATGCT GAGCGACGCC
GCCGGTTCGA TCTCGAGCAC GCTGGTGCCG GCAGGGCTGG AGAACTCCAA GGGCGTGATC
ACGGTCGCGT TCCGCAAGGA CCCGAACGAT CCGGCCTGGG CCGAGGATCC GGGGATGAAA
CAGTATCTGG CATTCATGAA GCAATACATG CCGAACGCCG ATCCGTCCGA GACGTATTAC
GTGTTTGGCT ATGCCACCGC GCAGACCTTC GAGCATGTGT TGAAGGCCTG CGGCGACGAA
CTGACCCGCG AGAACCTGAT GAAGCAGGCG GCCAGCATCA AGGATCTGGA ACTGCCGATC
CTGCTGCCCG GCATCAAGCT CAACACCAGC GCGACTCACT TCACGCCGAT GAGCCAGGAG
CAGTTGATGC AGTTCGACGG CACCAGGTGG AAGCCGATCG GCGTGGTGAT CGACGCCGCA
AAATAG
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| Protein sequence | MKKLMAAACA AACIVASAPA YAGNYGPGVT DTEVKIGQTM PYSGPASSFA AIGRAMTAYF
EKLNAEGGVN GRKINLVSLD DGYSPSKAVE QTRRLVESDE VLAIVGTFGS PTNFAIQKYL
NTRKVPGLFL GTGANRVSEP QTYPWSMGWQ PNNHAKGVIY AKYLLKERPN AKVAVLYQND
DFGRDYAKGF RDGLGDKAGS MIVKELSYEI TEPTVDSQIL LLKSTGADVF LNISTPKFSA
QAIKKMTETK WEALHMLSDA AGSISSTLVP AGLENSKGVI TVAFRKDPND PAWAEDPGMK
QYLAFMKQYM PNADPSETYY VFGYATAQTF EHVLKACGDE LTRENLMKQA ASIKDLELPI
LLPGIKLNTS ATHFTPMSQE QLMQFDGTRW KPIGVVIDAA K
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