| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4080 |
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| Symbol | |
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| ID | 3911887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4651251 |
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| End bp | 4652807 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885984 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_487684 |
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| Protein GI | 86751188 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.656205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.161644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA CCCACGGCCT GCGGCGCGCG CTGCAGATCA ACGCCGACGG CCTCGCCACC
GTGTTCAACG GCCGCCGCCG CAGCTGGCGC GACGTCGGCG AGCGCGTCGC CCGCCTCGCC
GCCGGCCTGC GTGCGCTCGG CGTCGGCGAA GGCGAGCGCG TCGCCGTGCT GTCGATGAAT
TCCGACCGCT ATCTGGAGCT GTATCTGGCC GCCGGCTGGT GCGGCGGCGT GATCGTGCCG
CTCAACATCC GCTGGAGCGC ACTGGAGAAC GAGGACGCGC TGCGCGACTG CCGTGCGGTG
GCTCTGGTCG TCGACAAGGC GTTCGCCGCG ACAGGCGCGA CGCTGGCGCA AGCGATTCCA
GGTCTGGCAA TGGTCTTTGC CGACGATGGC GATGTGCCGG CAGGCATGAA GAGCTACGAA
GACGTCATCG CGACCAACGC GCCGATCCCC GACGCGATGC GCAAGGCCGA GGACCTCGCC
GGTATTTTCT ATACCGGCGG CACCACCGGG CGTTCCAAGG GCGTGATGCT GAGCCACGGC
AACCTGATGG CCAACGCGCT CAATGCTTTG GGCGAAGGTC TGTTTCCCAG CACCTCGGTG
TATCTGCACG CGGCGCCGAT GTTCCATCTC GCCAACGGGG CGGCGATGTA TTCGCTGCTG
CTGTCCGGCG GCTCCAATGT CATGGTGCCG TCGTTCACGC CGGAAGGCGT GATGGCGGCG
ATGCAGAACG ACCGCGTCAC CGATGTGCTG CTGGTGCCGA CCATGATCCA GATGTTCGTC
GATCATCCGG CGCTGAAGAG CTACGACCTG TCGTCGCTGA AGAACATCAT CTACGGCGCC
TCCCCGATCA GCGAGGCGGT GCTCGCCCGC GCCAGCGCCG CGCTGCCCCA CGTGCAGTTC
ACCCAGGCCT ACGGCATGAC CGAATTGTCG CCGATCGCCA CGCTGCTGCA CTGGAAGGAG
CATATCGGCG ACGGCAAGGC CAAGGGACGG CAGCGCGCGG CCGGCCGCGC TACGCTCGGC
TGCGAGGTCC GCATCGTCGA CGCCGACGAC CAGCCGGTGC CGTACGGCAC CGTCGGCGAG
ATCTGCGTGC GCGGCGACAA TGTGATGATG GGCTATTGGG AGCGTCCGGA GGAGACCGCG
CGGGCGCTGG CGGGCGGCTG GATGCACACC GGCGACGGCG GCTACATGGA CGAGCACGGC
TTCGTCTACG TCGTCGACCG CGTCAAGGAC ATGATCATCT CCGGCGGCGA GAACGTCTAT
TCGGTCGAGG TCGAGAACGC GGTGGCGCAG CATCCGGCCG TGGCGCAATG CGCGGTGATC
GGGATTCCGC ACGAGGCCTG GGGCGAGCAG GTCCACGCCG TGGTCGTCAC CAAGGCCGGC
GCGAGCGTCA CCGCCGACGA ACTGATCGCG CATTGCAAGG CGCTGATCGC CGGCTACAAA
TGCCCGCGCA GCGTCGACAT CACCGAGACG CCGCTGCCGC TGTCGGGCGC CGGCAAGATC
CTCAAGCGCG AATTGCGACA GCCCTATTGG GAGAACCGCG AACGCCGCGT GAGCTGA
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| Protein sequence | MNITHGLRRA LQINADGLAT VFNGRRRSWR DVGERVARLA AGLRALGVGE GERVAVLSMN
SDRYLELYLA AGWCGGVIVP LNIRWSALEN EDALRDCRAV ALVVDKAFAA TGATLAQAIP
GLAMVFADDG DVPAGMKSYE DVIATNAPIP DAMRKAEDLA GIFYTGGTTG RSKGVMLSHG
NLMANALNAL GEGLFPSTSV YLHAAPMFHL ANGAAMYSLL LSGGSNVMVP SFTPEGVMAA
MQNDRVTDVL LVPTMIQMFV DHPALKSYDL SSLKNIIYGA SPISEAVLAR ASAALPHVQF
TQAYGMTELS PIATLLHWKE HIGDGKAKGR QRAAGRATLG CEVRIVDADD QPVPYGTVGE
ICVRGDNVMM GYWERPEETA RALAGGWMHT GDGGYMDEHG FVYVVDRVKD MIISGGENVY
SVEVENAVAQ HPAVAQCAVI GIPHEAWGEQ VHAVVVTKAG ASVTADELIA HCKALIAGYK
CPRSVDITET PLPLSGAGKI LKRELRQPYW ENRERRVS
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