| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4068 |
|---|
| Symbol | |
|---|
| ID | 3911875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4641968 |
|---|
| End bp | 4642711 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637885972 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_487672 |
|---|
| Protein GI | 86751176 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.936766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAGAG TTCACCGGAT CTTGATCGAC AAGCTCAAGG AGCATTCGCG GATCGGCCAC
GAGGATTTGG CCGCCATAAA GGCGCTCAGT TTCACGGTGC GCGAACTCAG GCGGAACGAG
GACTTCATCC GCCAGGGCGA CACCCCGAAG GTCTCGGCAC TCGTGATCGA TGGCATGGTC
GGACGCTATC ATCTGCTGCC GAACGGCCGG CGGCAATATT TGTCGTTTCA CATGGCGGGC
GACATGCCGG ATTCGCAGAC GTTGTTTCTC GACCGGATGG ACCACGCGGT CTGCGCGATC
GGCACGGCGC TGGTCGCGTC GATCCCGCAC AAGCAACTGA CGCGCACCTT CGAGCAGCGT
CCGCAGCTCG GGTTCGCCAT CTGGCGCGAA ACGCTGATCG ATGCGGCGAT TTTTCGGGAA
GCGATCACCA ACAACAGCGC ACGTGACATG ACCGCGCGGA TGGCGCATCT GTTCTGCGAG
TTGTTCTATC GCGCCGAAGC GTCGCGGCTG ACCCGCGGCA GGATCCTGAC GCTGCCGATC
GGCCTGGCGC AACTCGGCGA GACGCTGGGC ATGGCGATCG CGACCGTCAA TCGCACGCTG
TCCGAGCTGC GCTCCGCACA GACGATCGAA TTCCGCGGCG GCGAACTCGA GATGCTGGAC
TGGTCGCGCT TGGCCGAGAT CGGCCAGTTC GACCCGAGCT ATCTGCATCT CAGAAAGGCC
TCCCTCGTCG CATCCGACGA ATAG
|
|---|
| Protein sequence | MERVHRILID KLKEHSRIGH EDLAAIKALS FTVRELRRNE DFIRQGDTPK VSALVIDGMV
GRYHLLPNGR RQYLSFHMAG DMPDSQTLFL DRMDHAVCAI GTALVASIPH KQLTRTFEQR
PQLGFAIWRE TLIDAAIFRE AITNNSARDM TARMAHLFCE LFYRAEASRL TRGRILTLPI
GLAQLGETLG MAIATVNRTL SELRSAQTIE FRGGELEMLD WSRLAEIGQF DPSYLHLRKA
SLVASDE
|
|---|
| |