Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4058 |
Symbol | |
ID | 3911865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4629318 |
End bp | 4630307 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885962 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_487662 |
Protein GI | 86751166 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCA GAACGTTCCT GGCTTCCGCC GCAGGCGTCG CATTGAGCGG GCTCGCCGCG CCGGCGATCG CGCAGAGCAA GACCAAGATC CGCGTCGGCT ATCTGCATAC GCTTGCCGTC GACGGCCAGA TCTGGACCGG CGTCGATCGC GGCCTGTTCG CCAAGCACGG GCTCGAGCTC GAACTGCGCC AGTTCAACAC CGGCCTGGAG ATCTTCCAGG CGCTGATCGG CGGCAGCCTC GACGTGCTGT CCACCGGCGC GGTGCTGTCG AATTTCCCGG CGCGCGGCCA GGGCAAGGTG TTCCTGGTCA ACAATATCGA AGTGGCGACG GCGCAGCTCT GGGTGCATCG CGACATGGGC ATCAACAGCT TCGCCGACCT CAAGGGCAAA CGCATCGCCA CCGCGGTCGG CACCACCGCG CACGTCTTCC TCGACCGGGC GCTGCGCGCC AACAAGATCG ACCCGAAGGA GGTCGAGATC CTGAACCAGT CCATGCCGGC GGCGGTGACG TCGTTCATCT CCGGGGCGGT GCCTGCGGTG GCGCTGTGGG TGCCGTTCAA CGTCACCGTG CGCGACAAGG TCAAGGACGC GGTCAAGCTC ACCGACGCCT CGGCGTTCTA TCCGCAGGCC GCGATCATCG GCGGCTGGGC GGCGGCGAAC GATTACTACG ACGCCAACAA GGAGACGCTG ACCAACCTGA TCAAGGGCTG GGGCGAAGCC AATGACTACA TCGTCGCCAA CAGCGAGGAC GCCTTGGAGG CGATCCAGAA GAACCACTAC AGCCAGACGC CGCTGTCCGA CATCAAGGAG CAGTTCAAGG CGCAGAAGAT GTTCTCGTCG AAAGACTGGG TGCGGATGTA TGCCGACGGC AGCGTGACCA AATGGCTGCA GCAGTCGACC GACTTCTTCA TGGGCGCTGC CAACATCAAG GAATTCACCC CGGCGGACAA GTATTTCGAC CCGAGCCTGT ATCTGAAGGC GATCGGGTGA
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Protein sequence | MDRRTFLASA AGVALSGLAA PAIAQSKTKI RVGYLHTLAV DGQIWTGVDR GLFAKHGLEL ELRQFNTGLE IFQALIGGSL DVLSTGAVLS NFPARGQGKV FLVNNIEVAT AQLWVHRDMG INSFADLKGK RIATAVGTTA HVFLDRALRA NKIDPKEVEI LNQSMPAAVT SFISGAVPAV ALWVPFNVTV RDKVKDAVKL TDASAFYPQA AIIGGWAAAN DYYDANKETL TNLIKGWGEA NDYIVANSED ALEAIQKNHY SQTPLSDIKE QFKAQKMFSS KDWVRMYADG SVTKWLQQST DFFMGAANIK EFTPADKYFD PSLYLKAIG
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