Gene RPB_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4058 
Symbol 
ID3911865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4629318 
End bp4630307 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID637885962 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_487662 
Protein GI86751166 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA GAACGTTCCT GGCTTCCGCC GCAGGCGTCG CATTGAGCGG GCTCGCCGCG 
CCGGCGATCG CGCAGAGCAA GACCAAGATC CGCGTCGGCT ATCTGCATAC GCTTGCCGTC
GACGGCCAGA TCTGGACCGG CGTCGATCGC GGCCTGTTCG CCAAGCACGG GCTCGAGCTC
GAACTGCGCC AGTTCAACAC CGGCCTGGAG ATCTTCCAGG CGCTGATCGG CGGCAGCCTC
GACGTGCTGT CCACCGGCGC GGTGCTGTCG AATTTCCCGG CGCGCGGCCA GGGCAAGGTG
TTCCTGGTCA ACAATATCGA AGTGGCGACG GCGCAGCTCT GGGTGCATCG CGACATGGGC
ATCAACAGCT TCGCCGACCT CAAGGGCAAA CGCATCGCCA CCGCGGTCGG CACCACCGCG
CACGTCTTCC TCGACCGGGC GCTGCGCGCC AACAAGATCG ACCCGAAGGA GGTCGAGATC
CTGAACCAGT CCATGCCGGC GGCGGTGACG TCGTTCATCT CCGGGGCGGT GCCTGCGGTG
GCGCTGTGGG TGCCGTTCAA CGTCACCGTG CGCGACAAGG TCAAGGACGC GGTCAAGCTC
ACCGACGCCT CGGCGTTCTA TCCGCAGGCC GCGATCATCG GCGGCTGGGC GGCGGCGAAC
GATTACTACG ACGCCAACAA GGAGACGCTG ACCAACCTGA TCAAGGGCTG GGGCGAAGCC
AATGACTACA TCGTCGCCAA CAGCGAGGAC GCCTTGGAGG CGATCCAGAA GAACCACTAC
AGCCAGACGC CGCTGTCCGA CATCAAGGAG CAGTTCAAGG CGCAGAAGAT GTTCTCGTCG
AAAGACTGGG TGCGGATGTA TGCCGACGGC AGCGTGACCA AATGGCTGCA GCAGTCGACC
GACTTCTTCA TGGGCGCTGC CAACATCAAG GAATTCACCC CGGCGGACAA GTATTTCGAC
CCGAGCCTGT ATCTGAAGGC GATCGGGTGA
 
Protein sequence
MDRRTFLASA AGVALSGLAA PAIAQSKTKI RVGYLHTLAV DGQIWTGVDR GLFAKHGLEL 
ELRQFNTGLE IFQALIGGSL DVLSTGAVLS NFPARGQGKV FLVNNIEVAT AQLWVHRDMG
INSFADLKGK RIATAVGTTA HVFLDRALRA NKIDPKEVEI LNQSMPAAVT SFISGAVPAV
ALWVPFNVTV RDKVKDAVKL TDASAFYPQA AIIGGWAAAN DYYDANKETL TNLIKGWGEA
NDYIVANSED ALEAIQKNHY SQTPLSDIKE QFKAQKMFSS KDWVRMYADG SVTKWLQQST
DFFMGAANIK EFTPADKYFD PSLYLKAIG