| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4037 |
|---|
| Symbol | |
|---|
| ID | 3911844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4606775 |
|---|
| End bp | 4608001 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885941 |
|---|
| Product | NnrS |
|---|
| Protein accession | YP_487641 |
|---|
| Protein GI | 86751145 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA CGACGATCGA TCCTTCCGCT TCCGGCCCGG CCAAGCGCAA GCCGGTGCCG
CGCTATCGCG AGCAGGGCGG CTTGACCCTG CTGTCCGCCG GCTTCCGGCC GTTCTTCTTC
TTCGGCGCCG TGTTCGCGGC CGTCGCCGTG CTGCTGTGGC TGCCGGTGTA TTACGGCGAC
CTGACGCTAC AGACCGCGTT CGCGCCGCGC GACTGGCACG TCCACGAGAT GCTGTACGGC
TATCTGCCCG CGGTGATCAC CGGCTTCCTG CTCACCGCGA TCCCGAACTG GACCGGCCGG
CTGCCGCTGC AGGGCAGGCC GTTGCTGGTG CTGGTGCTGA CTTGGCTCGC CGGGCGGCTG
TGCGTGACGT TCTCGGCCGA TACCGGCTGG CTGGCCGCGA TGCTGGTCGA TGCGAGCTTC
ATGGCGCTGG TTGCGCTCGC TGCCGCGCGC GAAATCGCCG CCGGGAAGAA CTGGAGCAAC
CTCAACGTCG TCGCGCTGCT CACGCTGCTG CTCGCCGGCA ACATCGCCTT TCATCTCGAG
GCGCATGTCA ACGGCACCGC CGATTACGGC ATCCGCGCCG GCATCGGCGT GGTGATCCTG
CTGATCTCGC TGATCGGCGG ACGGATCACG CCGAGCTTCA CCCGCAACTG GCTGGTGCGC
GAGAATCCCG GCCGGCTGCC GGTTCCGTTC AACAAGCTCG ACATCGCGAT CGTCGCCTTC
AGCGCCGCGA CGCTGATCCT CTGGACCGTG TTGCCGATCA GCATGGTGAC CGGCACGGCG
CTGGCGCTGG CGGGCGTGGC GCATCTGGTG CGGCTGGCGC GCTGGGCCGG CGATCGCACG
CTGCGGGATC GGCTGCTGCT GGTGTTGCAT GTCGGCTATC TGTTCGTGCC GCTCGGCTTC
CTGCTCACCG CCTGCGCGGC GTTCGGGCTG GTTCCGCCCA GCGCCGGCAT GCACGCCTGG
ATGGTCGGCG GCGCCGGCAT CATGACGCTG GCGGTGATGA CCCGCGCCTC GCTCGGCCAT
ACCGGGCAGG AATTGCGGGC GTCGCTGCCG ACCCAGGCGG TCTATCTCGC CGCCCTGGTC
GCCGTGATGG CACGCGTCGG CGCGGCGCTG CTGCCGTCGT GGAGCGATCC GTTGCTGCAT
CTCTCGGTGC TGGGCTGGTC GGTCGCCTTC CTCGGCTTCG CGCTGAGCTA CGGCCCGACG
CTGCTGGCCC GTAGCAAGCC GCATTGA
|
|---|
| Protein sequence | MSSTTIDPSA SGPAKRKPVP RYREQGGLTL LSAGFRPFFF FGAVFAAVAV LLWLPVYYGD
LTLQTAFAPR DWHVHEMLYG YLPAVITGFL LTAIPNWTGR LPLQGRPLLV LVLTWLAGRL
CVTFSADTGW LAAMLVDASF MALVALAAAR EIAAGKNWSN LNVVALLTLL LAGNIAFHLE
AHVNGTADYG IRAGIGVVIL LISLIGGRIT PSFTRNWLVR ENPGRLPVPF NKLDIAIVAF
SAATLILWTV LPISMVTGTA LALAGVAHLV RLARWAGDRT LRDRLLLVLH VGYLFVPLGF
LLTACAAFGL VPPSAGMHAW MVGGAGIMTL AVMTRASLGH TGQELRASLP TQAVYLAALV
AVMARVGAAL LPSWSDPLLH LSVLGWSVAF LGFALSYGPT LLARSKPH
|
|---|
| |