| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4011 |
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| Symbol | |
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| ID | 3911818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4577188 |
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| End bp | 4578723 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885915 |
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| Product | amine oxidase |
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| Protein accession | YP_487615 |
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| Protein GI | 86751119 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.984835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0140967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC CCGGTCTCAA ACCCGCTCCC CGTCCTTCGA ATGATCGCGC GCCGCATGCG
GTGGTGATCG GCTCCGGCTT TGGCGGCTTG GCCGCTGCGG TCCGGCTCGG TGCCAAAGGG
TACCGGGTCA CCGTTCTTGA AAAGCTCGAT GCGCCCGGCG GCCGCGCTTA CGTCCACAAG
CAGGACGGCT TCACCTTCGA CGCCGGCCCG ACCATCGTCA CCGCGCCGTA TCTGTTCGAG
GAGCTGTGGA CGCTGTGCGG CAAGCGGATG TCCGACGACG TCGTGCTGAA GCCGATGTCG
CCGTTCTACC GCATCCGCTT CGACGACGGC ACCTTCTTCG ACTATTCGGA CGACCGTAAC
GCGGTGCTGG ACCAGATCGC GAAATTCTGC CCGGACGACG TCCCGGCCTA TGACCGCTTC
ATGGCGGCGT CGCAGGCGAT CTTCAAGGTC GGCTTCGAGC AGCTCGGCGA CCAGGCGTTC
AGCCGCTTCA CCGACATGCT GAAGATCGCG CCGGACATGA TCAAGCTGGA GAGCTATCGC
AGCGTCTTCG GCATGGTCGC CAAGCACTTC AAGGACCCGA AGCTGCGCCA GGTGTTCAGC
TTCCATCCGC TGCTGATCGG CGGCAATCCG TTCATGTCGA GTTCGGTGTA CTGCCTGATC
ACCTATCTCG AAAAGCAGTG GGGCGTGCAT TCGGCGATGG GCGGCACCGG CGCGCTGGTC
TCCGGCCTCG TCAAGCTGAT CGAAGGCCAG GGCAACACGA TCCGCTATCA GCAGGACGTC
CGCCGCATCG TGGTCGAGAA CGGCGCCGCC CGCGGCGTCG AGCTCGCCGA CGGCGAGGTG
ATCAAGGCCG ATATCGTGGT GTCGAACGCC GATTCGGCCT CGACCTATCG CTACCTGCTG
GCGCCGGAGA CGCGCAAGCG CTGGACCGAC GCCAAGATCG AGCGCTCGCG CTATTCGATG
AGCCTGTTCG TCTGGTACTT CGGCACCAAG CGGCGCTACG ACGACGTCAA GCACCACACC
ATCCTGCTCG GGCCGCGCTA CAAAGAGCTG ATCACCGACA TTTTCTCCCG CAAGATCGTC
GCCGACGATT TCAGCCTGTA TCTGCACCGC CCGACCGCGA CCGATCCGTC GCTGGCGCCG
CCCGGCTGCG ATACGTTCTA CGTGCTGTCG CCGGTGCCGA ATCTGCTCGG CGACATCGAC
TGGACCACCA AGGCCGAGAA CTATCGCGCA TCGATTGCGA AGATGCTCGG CGCCACCGTG
CTGCCCGATC TCGAGAATCA GGTGGTGAGT TCGAAGCTCA CCACGCCGCT GGATTTCCGC
GACCGGCTGT CCTCGTTCCG CGGCGCCGCA TTCGGCCTCG AGCCGGTGCT GTGGCAGAGC
GCCTGGTTCA GGCCGCACAA CCAGAGCGAA GACGTCAAGA ATTTGTATCT CGTCGGTGCC
GGAACCCATC CCGGCGCCGG TCTGCCCGGG GTGCTGTCCT CGGCGCGTGT GCTCGATTCC
CTGGTCCCCG AGGCCGACAG TCTGGTGACG TCATGA
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| Protein sequence | MLDPGLKPAP RPSNDRAPHA VVIGSGFGGL AAAVRLGAKG YRVTVLEKLD APGGRAYVHK
QDGFTFDAGP TIVTAPYLFE ELWTLCGKRM SDDVVLKPMS PFYRIRFDDG TFFDYSDDRN
AVLDQIAKFC PDDVPAYDRF MAASQAIFKV GFEQLGDQAF SRFTDMLKIA PDMIKLESYR
SVFGMVAKHF KDPKLRQVFS FHPLLIGGNP FMSSSVYCLI TYLEKQWGVH SAMGGTGALV
SGLVKLIEGQ GNTIRYQQDV RRIVVENGAA RGVELADGEV IKADIVVSNA DSASTYRYLL
APETRKRWTD AKIERSRYSM SLFVWYFGTK RRYDDVKHHT ILLGPRYKEL ITDIFSRKIV
ADDFSLYLHR PTATDPSLAP PGCDTFYVLS PVPNLLGDID WTTKAENYRA SIAKMLGATV
LPDLENQVVS SKLTTPLDFR DRLSSFRGAA FGLEPVLWQS AWFRPHNQSE DVKNLYLVGA
GTHPGAGLPG VLSSARVLDS LVPEADSLVT S
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