Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3994 |
Symbol | |
ID | 3911801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4561850 |
End bp | 4562773 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885898 |
Product | photosynthetic reaction center subunit M |
Protein accession | YP_487598 |
Protein GI | 86751102 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0754193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAT ATCAGAACAT CTTCACGCAG GTCCAGGTTG AAGGACCTGC CTATGCGGGG GTGCCGCTAC GACCCGGCAG TTCCCCCCGC GAGACCAAGA CCACCTTCAG CTACTGGCTC GGAAAGCTCG GCGATGCGCA GGTGGGTCCG ATCTATCTCG GCTTCACCGG GATCTGTTCG GTGCTGTGCG GCTTCGTCGC GATCGAGATC ATCGGCCTCA ACATGTTGGC GGCGGTGGAC TGGAGTCCGA TCGAATTCCT GCGCCAGTTC TGCTGGCTCG CGCTCGAGCC GCCGAAGCCG GAATACGGTC TGTCGATCCC GCCGCTCAAG GAAGGCGGCT GGTGGCTGAT GGCCGGCTTC TTCCTGACGG TGTCCATCGT GCTGTGGTGG GTCCGCACCT ATCGCCGCGC GCGGGCGCTC GGCATGGGGA CCCACGTGTC GTGGGCGTTC GCTTCGGCGA TCCTGTTGTA CCTCGCCATC GGCTTCATTC AGCCGCTGCT GATGGGCACC TGGAGCGAAG CTCCGCCGTT CGGCATCTTC CCGCACCTCG ACTGGACCAA CAACTTCTCG ATCAAGTACG GCAATCTCTA CTACAACCCC TTCCACTGTC TCTCGATCGC CTTCCTGTAT GGCTCGGCCC TGCTGTTCGC CATGCACGGT GCGACCATTC TGGCCGTGAG CCGCTACGGC GGCGAGCGCG AAATCGAGCA GATGCTGGAC CGCGGTACCG CACTTGAACG CGCTGCTCTG TTCTGGCGCT GGACGATGGG CTTCAACGCC ACCGCGGAAT CGATCCATCG CTGGGCCTGG TGGTTCGCCG TTCTCACGCC GCTGACCGGC GCGATCGGCA TCATCCTCAC CGGTCCGGTG GTCGACAACT GGTTCGACTG GGGTGTGAAG CACGGTCTCG CTCCGCCGCG CTGA
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Protein sequence | MAQYQNIFTQ VQVEGPAYAG VPLRPGSSPR ETKTTFSYWL GKLGDAQVGP IYLGFTGICS VLCGFVAIEI IGLNMLAAVD WSPIEFLRQF CWLALEPPKP EYGLSIPPLK EGGWWLMAGF FLTVSIVLWW VRTYRRARAL GMGTHVSWAF ASAILLYLAI GFIQPLLMGT WSEAPPFGIF PHLDWTNNFS IKYGNLYYNP FHCLSIAFLY GSALLFAMHG ATILAVSRYG GEREIEQMLD RGTALERAAL FWRWTMGFNA TAESIHRWAW WFAVLTPLTG AIGIILTGPV VDNWFDWGVK HGLAPPR
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