| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3895 |
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| Symbol | |
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| ID | 3911699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4450910 |
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| End bp | 4452181 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885796 |
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| Product | ring hydroxylating dioxygenase, Rieske (2Fe-2S) protein |
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| Protein accession | YP_487499 |
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| Protein GI | 86751003 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC TGGCGGAGCT CTCCACCAAT CCCGACGACC TGATCCGCAA GGATCGCGTT
CGCACCCCGC TCTACACCGA TCCGGCGATC TTCGACGCCG AGATGACCAA GATCTTCCGC
AATACATGGG TCTGGGTCGC GCATGTCAGC GAGATCGCCA ACAACGGCGA CTTCAAGATG
GCGCAGGTCG GGCTCGAGCC GGTGATCGTG GTGCGCGACC GCAAGGGCAA GGTCCACGTC
CACCTCAACC GCTGCCGGCA TCGCGGCGCG ACGCTGTGCG AAGTGCGCAA GGGCAAGACC
TCCAGCTTGG TCTGCCCGTA TCACGGCTGG GGCTATTCGC TCGACGGCAA GCTGCGCGGC
GTGCCTTACG AGAACGGCTA CGACGAGACG ACGCTCGACC GCAACGAGCT GTCTTTGAAG
TCGCTGCGGG TCGAGGAATA TAACGGCCTG ATCTTCGCGA CCTTCCGCGA CGACATCGAG
CCCCTGGCCG ACTTCCTCGG GCCGGCGAAG AAGTGGATCG ACCTGTTCAT GAAGCAGGGC
GGCGGGTTTC CGGTGAAGGT GCTCGGCGAA CACAAGTTCC GCTTTCCCGG CAACTGGAAG
ATCCAGCTCG AGAACACCAC CGACGCCTAT CACTTCCCGC TGGTGCACAA ATCCTTCCTC
ACCGCGGTCG ACAAGGAAAC CGAGCAGCAG CTCGACATGC TGAACAATGG CGGCTTCGTC
GAGGATCTCG GCAACGGCCA CAGCGTGATG GTGATGATCC CCGAACTGAT CGACCTCGAC
GACAATCTCG AGGCGCCGAT CCCGGAGAAG TTCGCCGATC TCGCCAAGGA GCTCGTCGCC
GAAGGCTATT CCGACACGGA AGTCCGGCGC ATCGTCCGCG CCGCCGGCGG CTCCGGCTTC
AACATCAATC TGTTTCCGAA TCTGGCCTGC TCGATGGCGT TCTTCCGCGT GCTGCAGCCG
GTCTCGGTGA ACGAGACCGA GATCCGCCAC ATCGCGATCG GCATGGACGG CGGGCCGGCG
GCGGCCAACC GCGCGCGGAT CCGCCTGCAC GAATTCTTCC AGGGCCCGAT GGGCTTCGGC
AGCCCCGACG ACGCTGAGGT GTGGGATCGC GTCCAGCACG GCGCGCAGGG CGGCGACGAG
ATGTGGATCA TGCTGAACCG CGGTTTTCCA AAGGAGGAAA ACCTGCCCGA CGGGCGCGCC
CGCAGCGACG TCAGCGCCGA AACCGGGATG CGCGCCGCCT ATGATCAATG GAAGCGGATG
ATGACGGTCT GA
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| Protein sequence | MTSLAELSTN PDDLIRKDRV RTPLYTDPAI FDAEMTKIFR NTWVWVAHVS EIANNGDFKM
AQVGLEPVIV VRDRKGKVHV HLNRCRHRGA TLCEVRKGKT SSLVCPYHGW GYSLDGKLRG
VPYENGYDET TLDRNELSLK SLRVEEYNGL IFATFRDDIE PLADFLGPAK KWIDLFMKQG
GGFPVKVLGE HKFRFPGNWK IQLENTTDAY HFPLVHKSFL TAVDKETEQQ LDMLNNGGFV
EDLGNGHSVM VMIPELIDLD DNLEAPIPEK FADLAKELVA EGYSDTEVRR IVRAAGGSGF
NINLFPNLAC SMAFFRVLQP VSVNETEIRH IAIGMDGGPA AANRARIRLH EFFQGPMGFG
SPDDAEVWDR VQHGAQGGDE MWIMLNRGFP KEENLPDGRA RSDVSAETGM RAAYDQWKRM
MTV
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