Gene RPB_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3872 
Symbol 
ID3911676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4427697 
End bp4428290 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID637885773 
Producthemerythrin HHE cation binding region 
Protein accessionYP_487476 
Protein GI86750980 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAA TGATTGAATT ACTTCACGAC GAGCACCGCA ACATCGCGAA GCTGCTCAAC 
GTCATCGAAC ACGAACTCAG CGTGTTCGAT CGTCGCGAAC GGCCCGACTA CGAGATCTTC
CAGGCCATCA TCCAGTACTT CCGCGAGTAT CCGGAGGCCT GCCATCATCC GAAGGAGGAT
GTGGTCTACC AGATCCTCAA GGAACGCAAC CCGGCCGTCG CCGGCGCCGT CGGCGACGTC
GAAGCCGAGC ACGAGCTGGA GGGCGAACGC CTCGACCGTT TCGCCAAGGT GGTCGAGGAC
GTCCTCGCCG ACCAGGAATT GCCGCGCGAG GCCTTCCACG CCGCCGCCCA GGAGTTCCTC
GAGCATCAAC GCCGCCACAT GGCGAAAGAG GAACAGTTGC TGTTCCCGGC CGCGCTCGAG
ACCCTGACCG ACGATGACTG GGCCAGGATC GACGCGCGGA TCGAGGAGCG CAAGGACCCG
ATGTTCGACG GCGAGACCGC GAGCAAGTTC CACAACCTCT ACGCGACCAT TCTGCGCTGG
GAGCAGGAAA CCCAGGAAGA CCGCAGCAGG GCCGCGGCGG CCGCCGTGCG CTGA
 
Protein sequence
MSRMIELLHD EHRNIAKLLN VIEHELSVFD RRERPDYEIF QAIIQYFREY PEACHHPKED 
VVYQILKERN PAVAGAVGDV EAEHELEGER LDRFAKVVED VLADQELPRE AFHAAAQEFL
EHQRRHMAKE EQLLFPAALE TLTDDDWARI DARIEERKDP MFDGETASKF HNLYATILRW
EQETQEDRSR AAAAAVR