Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3872 |
Symbol | |
ID | 3911676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4427697 |
End bp | 4428290 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885773 |
Product | hemerythrin HHE cation binding region |
Protein accession | YP_487476 |
Protein GI | 86750980 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGAA TGATTGAATT ACTTCACGAC GAGCACCGCA ACATCGCGAA GCTGCTCAAC GTCATCGAAC ACGAACTCAG CGTGTTCGAT CGTCGCGAAC GGCCCGACTA CGAGATCTTC CAGGCCATCA TCCAGTACTT CCGCGAGTAT CCGGAGGCCT GCCATCATCC GAAGGAGGAT GTGGTCTACC AGATCCTCAA GGAACGCAAC CCGGCCGTCG CCGGCGCCGT CGGCGACGTC GAAGCCGAGC ACGAGCTGGA GGGCGAACGC CTCGACCGTT TCGCCAAGGT GGTCGAGGAC GTCCTCGCCG ACCAGGAATT GCCGCGCGAG GCCTTCCACG CCGCCGCCCA GGAGTTCCTC GAGCATCAAC GCCGCCACAT GGCGAAAGAG GAACAGTTGC TGTTCCCGGC CGCGCTCGAG ACCCTGACCG ACGATGACTG GGCCAGGATC GACGCGCGGA TCGAGGAGCG CAAGGACCCG ATGTTCGACG GCGAGACCGC GAGCAAGTTC CACAACCTCT ACGCGACCAT TCTGCGCTGG GAGCAGGAAA CCCAGGAAGA CCGCAGCAGG GCCGCGGCGG CCGCCGTGCG CTGA
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Protein sequence | MSRMIELLHD EHRNIAKLLN VIEHELSVFD RRERPDYEIF QAIIQYFREY PEACHHPKED VVYQILKERN PAVAGAVGDV EAEHELEGER LDRFAKVVED VLADQELPRE AFHAAAQEFL EHQRRHMAKE EQLLFPAALE TLTDDDWARI DARIEERKDP MFDGETASKF HNLYATILRW EQETQEDRSR AAAAAVR
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