Gene RPB_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3678 
Symbol 
ID3911480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4218338 
End bp4218835 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID637885580 
Productcarbon-monoxide dehydrogenase small subunit 
Protein accessionYP_487284 
Protein GI86750788 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGGC CGATGGCCAA GATTTCCCTG ATCGTGAATG GCAATCCCGT GACCGCGAAT 
GTCGATCCGC GCACGCTGCT GGTGCAGTTT CTGCGCGAGC ATCTGCGGCT CACGGGCACC
CATGTCGGCT GCGACACGTC GCAGTGCGGC GCCTGCGTCG TGCATCTCGA CGGCAAGGCG
GTGAAGTCCT GCACCACGCT GGCGGTGATG GCGGACGGCC ATGAAGTGAC GACGATCGAG
GGACTGGCCG CCGATGGCGC GCCGCTGCAT CCGATGCAGG AGGCATTTCG CGAACATCAC
GGGCTGCAAT GCGGTTTCTG CACGCCGGGC ATGATCATGA CCGCGGTCGA TCTGGTGCAC
CGCAAGGGGC ATGAGCTGTC AGACGCCACG ATTCGCGAGG AGCTCGAAGG CAATCTGTGC
CGCTGCACCG GCTATCAGAA CATCGTGCTG TCGATCGCGG CCGGCGCCAA GGCGATGGCG
AATTCCGATC TCGCGTAA
 
Protein sequence
MRGPMAKISL IVNGNPVTAN VDPRTLLVQF LREHLRLTGT HVGCDTSQCG ACVVHLDGKA 
VKSCTTLAVM ADGHEVTTIE GLAADGAPLH PMQEAFREHH GLQCGFCTPG MIMTAVDLVH
RKGHELSDAT IREELEGNLC RCTGYQNIVL SIAAGAKAMA NSDLA