| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3566 |
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| Symbol | |
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| ID | 3911368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4086879 |
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| End bp | 4088114 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885468 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_487172 |
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| Protein GI | 86750676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.172998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.680161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCC TCTCCCGTTC GATCGCCACC CTGGCGGCCG CCGCCCTGCT GTCCGCAGCC
GCCGGACAGG CGATGGCGCA GAAGAAATAT GGCCCCGGCG CCAGCGACAC CGAAGTCAAG
ATCGGCAACA TCGTGCCTTA CTCGGGCCCG GCGTCGGCCT ATGGCAGCGT CGGCAAGGCG
CAAGAAGCCT ATTTCAAGAT GATCAACGAC AAGGGCGGCA TCAACGGCCG CAAGATCGTC
TACATCTCCA ACGACGACGC CTATTCGCCG CCGAAATCGG TCGAGCAGAC CCGTAAGCTG
GTCGAGAGCG ACGAGGTGCT GTTCATGTTC AGCCCGCTCG GCACGCCGTC CAACACCGCG
ATCCAGAAAT ATCTCAACGC CAAGAAAGTG CCGCATCTGT TCCTGGCGTC GGGCGCCACC
AAGTGGAACG ATCCGAAGCA CTTTCCGTGG ACGATGGGCT GGCTGCCGAG CTACCAGAGC
GAAGGCCGGA TCTACGCCAA GTATCTGATG AAGGAGAAGC CGGACGCCAA GATCGCCGTG
CTGTATCAGG GCGACGATTT CGGCAAGGAC TATCTCAAGG GCCTCAAGGA CGGCCTCGGC
GCCAAGGCTT CGCAGGTGGT GATCGAGGAC AGCTACGAGC TGACCGAGCC GACCGTCGAT
TCCCACATCG TCAAAATCAA GGCCGCCAAT CCCGACGTGC TGGTGATCTT CGCCACGCCG
AAATTCGCGG CGCAGACCAT CAAGAAGGTC GCCGAACTGG CGTGGAAGCC GATGATGATC
GTGCCGAACG TCTCGGCCTC GACCGGCAGC GTGATGAAGC CCGCCGGCTT CGAGAACGCC
CAGGGCATCG TCTCCGCCTC CTACGCCAAG GACGCCACCG ACAAGCAGTG GGAAAACGAC
CCCGGCATGA AGGCGTATTA CGAGTTCATG GAGAAGTATG CGCCGCAGGC CAGCCGCGCT
GACTCATCGT TCATGACCGG CTACAACATC GCCGAGACGG TCGCGGTGCT GATCAAGCAA
TGCGGCGACG ATCTGTCCCG CGAGAACGTC ATGAAGCAGG CGGCCAACCT CAAGGACGTC
CAGCTCGGCG GCCTGCTGCC GGGCATCAAG CTCAACACCA GCGCGACCGA CTTCGCGCCG
ATCGAACAGC TGCAGCTGAT GAAGTTCCAG GGCGAGAACT GGAAGCTGTT CGGCGACGTG
ATCGAGGGCG AAGTCGCCGC GCCGACCGGC GGCTAG
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| Protein sequence | MSALSRSIAT LAAAALLSAA AGQAMAQKKY GPGASDTEVK IGNIVPYSGP ASAYGSVGKA
QEAYFKMIND KGGINGRKIV YISNDDAYSP PKSVEQTRKL VESDEVLFMF SPLGTPSNTA
IQKYLNAKKV PHLFLASGAT KWNDPKHFPW TMGWLPSYQS EGRIYAKYLM KEKPDAKIAV
LYQGDDFGKD YLKGLKDGLG AKASQVVIED SYELTEPTVD SHIVKIKAAN PDVLVIFATP
KFAAQTIKKV AELAWKPMMI VPNVSASTGS VMKPAGFENA QGIVSASYAK DATDKQWEND
PGMKAYYEFM EKYAPQASRA DSSFMTGYNI AETVAVLIKQ CGDDLSRENV MKQAANLKDV
QLGGLLPGIK LNTSATDFAP IEQLQLMKFQ GENWKLFGDV IEGEVAAPTG G
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