| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3552 |
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| Symbol | |
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| ID | 3911354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4065589 |
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| End bp | 4067802 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885454 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_487158 |
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| Protein GI | 86750662 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0127436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCG CTCGTCCGCG GTCGCGCAGC CTCGTGCTGC TGCAGGCCAC TGCGCTCGTT
TCCACTTGTC TTGTTTCGCT GCCGGCGATG GCACAGAGCC CTCGCGACGG CACTTTGCCG
CCGGTGACGG TGCAGGCGCC GGATCAGGCC CGCCCGGCCG TGCCGCGCGC GCAGCGCAGC
CCGTCGCGGG CGACGCGAGC GGTGCGCGCC ACCAGCCCGG CGCCGTTGCC GGCCGCCGCA
CCGGTCGACA GCGCGCAGGC GGCGAGAGGC CCGGCGTTGA CCGTGCTCAC GGTGCAGCAG
GCCTTGAACG ACATTCAGCA GACGCCCGGC GGCGTCGCGC TGGTGCCCGC CAACGCCTAT
CGCAACTCGA CGGTGTCCAA CACCATCAAG GACATTCTCG ACTACGTGCC GGGCGTATTC
GCGCAGCCGA AATGGGGCGA CGACACCAGG CTGTCGATCC GCGGCTCGGG GCTGTCGCGC
AACTTCCATC TGCGCGGCGT GCAGCTCTAC ATGGACGGCA TTCCGATCAA CACCGCGGAC
GGCTATGGTG ATTTTCAGGA GATCGACCCC ACCGCGTACA AATACGTCGC GGTCTACAAG
GGCGCCAACG CGCTGCAGTT CGGCGCCAAT TCGCTCGGCG GCGCGATCAA TTTCGTCACC
GCGACCGGCC GCGATCCGTT CCCGAACGGC GTGAGCGTCG ACGCCGGTGC GTTCGGCTAT
CGCCGGCTGC AGGCCAATGC CGGTGGCGTC AACGGCCCGT GGGACGGCTA TGTCACCGCC
TCGACGCAGG CGGCTGAAGG TTTCCGCAAC CACAGCGACG GCGAGGCCCA CCGGCTCAGC
GCCAATATCG GCTACCAGAT CACGCCGGAC ATCGAGACCC GGTTCTATCT CAACGCCAAT
CACGTCCGGC AGCGGATCCC CGGCAGCGTC ACCAAGACCT CGGCGCTGAC CTCGCCGGAA
ACAGCCGCAG CCAACAACGT CGCGCTCGAC CAGCAGCGCA ACATCGACAC GGTGCGGCTC
GCCAACAAGA CCACGATCCG GTTCGACAAC ACGGTGGTCG ATTTCGGCGC CTTCGGCGTC
GATCGCCACC TGATGCATCC GATCTTCCAG TGGCTGGACT ATCGCTATCA GGACTATGGC
GGCTTCGCCA AAGTCACCGA CGATCGCTTC ATCGGCGGCT ATCGCAACCG TCTGGTCGCC
GGCGTCAACC TGCTCAACGG TCGGATCGAC AACAAGCAAT ACGTCAACCT CGCCGGGCAG
AAGGGTGCGC TGGCGTTCTC GTCGATCGAC AAATCCACCA ACACGTCGTT CTACGTCGAG
GACTCGTTCT ATTTCCTGCG CAACGTTGCG CTGGTCGCCG GCACGCAGTT CCTGCACGCC
ACCCGTGACC GGGTCGTCCG ATTCACGTCG AACAACGATC CGTCGGGGAC GACGGAGTTC
AACTTATGGA GTCCCAAGGC TGGGTTGTTG TGGGACATCG ATCCGACCTG GCAGGCGTTC
GGGAACATCT CGCGGAGCGC CGAAGTGCCG AGCTTCGGCG AGAGCTCTGC AGCGCAGTCG
ATTCCCTTCA CCAGCATCCG GCCGCAGCGT GCGACGACTT ACGAGATCGG CACCCGTGGC
CGTCGGCCCG ATCTGGTCTG GGAGCTGACC GGCTATCGCG CCGAGATCAA GGACGAGCTG
CTCTGCATCT ACAGTTCGTT AGGCAATTGC AACGTGACCA ACGCCGATCG CAGCGTGCAT
CAGGGCATCG AGGCCGGGCT CGGCGTCGCG CTGTTCAAGA ACCTGTTCGA GCGAGGACAC
GCGCCCGACC GGCTGTGGCT GAACATGGCC TACACGCTGA ACGACTTCCG CTTCGACAAC
GATGCGACCT TCGGCAACAA TCTGCTGCCC GGCGCGCCGC GGCACTATCT GCGCGCCGAA
TTGCTCTACA AGAATCCGAA CGGGTTCTAT GCCGGCCCGA ACGTGGAGTG GGTGCCGCAG
GCCTATTTCG TCGACAGCGC CAACACGCTG AAGACCGAGC CCTATGCGCT GCTCGGCCTC
AAGGCGGGGA TCGACAATGG CGGGCCGTAC TCGATCTATA TCGAGGGCCG CAACCTCACC
AACAAGGCCT ACATCGCCTC CGCCAGCATC ATCGACAAGG CCACCGCGAC CTCGCCTCTG
TTCGAACCGG GCACCGGACG CGCGGTCTAT GCCGGCTTCA AGGTGCGCTG GTGA
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| Protein sequence | MSSARPRSRS LVLLQATALV STCLVSLPAM AQSPRDGTLP PVTVQAPDQA RPAVPRAQRS
PSRATRAVRA TSPAPLPAAA PVDSAQAARG PALTVLTVQQ ALNDIQQTPG GVALVPANAY
RNSTVSNTIK DILDYVPGVF AQPKWGDDTR LSIRGSGLSR NFHLRGVQLY MDGIPINTAD
GYGDFQEIDP TAYKYVAVYK GANALQFGAN SLGGAINFVT ATGRDPFPNG VSVDAGAFGY
RRLQANAGGV NGPWDGYVTA STQAAEGFRN HSDGEAHRLS ANIGYQITPD IETRFYLNAN
HVRQRIPGSV TKTSALTSPE TAAANNVALD QQRNIDTVRL ANKTTIRFDN TVVDFGAFGV
DRHLMHPIFQ WLDYRYQDYG GFAKVTDDRF IGGYRNRLVA GVNLLNGRID NKQYVNLAGQ
KGALAFSSID KSTNTSFYVE DSFYFLRNVA LVAGTQFLHA TRDRVVRFTS NNDPSGTTEF
NLWSPKAGLL WDIDPTWQAF GNISRSAEVP SFGESSAAQS IPFTSIRPQR ATTYEIGTRG
RRPDLVWELT GYRAEIKDEL LCIYSSLGNC NVTNADRSVH QGIEAGLGVA LFKNLFERGH
APDRLWLNMA YTLNDFRFDN DATFGNNLLP GAPRHYLRAE LLYKNPNGFY AGPNVEWVPQ
AYFVDSANTL KTEPYALLGL KAGIDNGGPY SIYIEGRNLT NKAYIASASI IDKATATSPL
FEPGTGRAVY AGFKVRW
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