Gene RPB_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3529 
Symbol 
ID3911331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4039254 
End bp4040864 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content68% 
IMG OID637885431 
Producthypothetical protein 
Protein accessionYP_487135 
Protein GI86750639 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.370836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA GCGAAACCGG TCCGGACGAT AGCGACGGCA AGATCTTCAT CGGCAAAGGC 
GAGCAGCCGG CCTGGCTGAC GCTCGGCCTC GGCAATCGCC ACGGCCTCGT CACCGGCGCC
ACCGGCACCG GCAAGACGGT GACGCTGCAG GTGATGGCCG AAGGTTTTGC GCGCGCCGGT
GTGCCGGTGT TCGCCGCCGA CATCAAGGGC GATCTCTCCG GCATCGCCGA AGTCGGCGAG
GCCAAGGACT TCATCCTGAA GCGCGCCGCC GCGATGGGGC TGGCGTTCCA GCCCGATCAA
TTCAGCACGG TGTTCTGGGA CGTGTTCGGC GAGCAGGGCC ATCCGGTGCG CGCCACCGTC
TCGGAGATGG GGCCGCTGCT GCTGTCGCGG ATGCTCGATC TCAACGACGT CCAGGAGGGC
GTGCTCAACG TCGCGTTCCG CGTCGCCGAC GACATGGGCC TGCCGCTGGT CGACATGAAG
GATCTGCGCG CGATGCTCGA CGCGATCGCG CCGATCGCCG CCAAGGTCGC CGAGAACGGC
GACGTCAATG CCGACATCCG CCAGGCCGCG GCGTCGCTCG GCAACGTCAC CAAGCAGACC
GTCGGCACCA TCCAGCGGCA ATTGCTGGTG CTGGAGAACC AGGGCGGCGC CAGCTTCTTC
GGCGAACCGG CGCTGCAGCT CAAGGATTTC ATCCGCACCG ACGGCCAGGG CCGCGGCGTG
GTCAACATCC TGACCGCCGA CAAGCTGATG TCCAATCCGC GGCTGTACGC GACCTTCCTG
CTGTGGATGC TGTCTGAACT GTTCGAGGAA CTGCCCGAAC TCGGCGACCC CGACAAGCCG
AAGCTGGTGT TCTTCTTCGA CGAGGCGCAT CTGCTGTTTA ACGACGCGCC GAAGCCGCTG
ATGGATAAAA TTGAACAGGT CGTGCGATTG ATCCGCTCAA AAGGCGTCGG CGTGTACTTC
GTGACGCAGA ATCCGATCGA CGTGCCGGAT CGCGTGCTGG CGCAGCTCGG CAATCGGGTG
CAGCATGCGC TGCGCGCCTT CACGCCGCGC GACCAGAAGG CGGTGGCGGC GGCGGCGGAG
ACGTTCCGGC CCAATCCGAA GCTCGACACC ACGAAGGCGA TCACCGAGCT CGGCAAGGGC
GAGGCGCTGG TGTCGTTCCT CGAAGGCAAC GGCACGCCGG CGATGGTCGA GCGGGTGATG
ATCCGCCCGC CGTCGGCGCG GATCGGCACG ATCACGCCGG AGGAACGCGC CGCGATCATC
AAGGCGAGCC CGATGAAGGG CAAATACGAC ACCGCGATCG ATTCGGAATC GGCTTACGAG
AAGTTGCGCG ACCGCATCGA AGGCAAGAAT GCCGGGGCCG AAGCCGCGCC GGGCGAGGGC
GGGCTGCTCG GCCAGCTCGG CAGCATCGTC TCCACCGTGT TCGGCACCAA CACGCCGCGC
GGCAAGCTCA CCACCGGGCA GGTGGTGGCG CGCGGCGTCG CCCGCACCGT CGCCACCACG
GTGGTCGGCG GCATCGCCGC GCAGCTCGGC AAGAAGGTCG GCGGCGCGAT GGGCAGCTCG
GTCGGCCGCT CGATCGTGCG CGGCACGCTG GGCGGCCTGC TGCGGCGGTG A
 
Protein sequence
MTASETGPDD SDGKIFIGKG EQPAWLTLGL GNRHGLVTGA TGTGKTVTLQ VMAEGFARAG 
VPVFAADIKG DLSGIAEVGE AKDFILKRAA AMGLAFQPDQ FSTVFWDVFG EQGHPVRATV
SEMGPLLLSR MLDLNDVQEG VLNVAFRVAD DMGLPLVDMK DLRAMLDAIA PIAAKVAENG
DVNADIRQAA ASLGNVTKQT VGTIQRQLLV LENQGGASFF GEPALQLKDF IRTDGQGRGV
VNILTADKLM SNPRLYATFL LWMLSELFEE LPELGDPDKP KLVFFFDEAH LLFNDAPKPL
MDKIEQVVRL IRSKGVGVYF VTQNPIDVPD RVLAQLGNRV QHALRAFTPR DQKAVAAAAE
TFRPNPKLDT TKAITELGKG EALVSFLEGN GTPAMVERVM IRPPSARIGT ITPEERAAII
KASPMKGKYD TAIDSESAYE KLRDRIEGKN AGAEAAPGEG GLLGQLGSIV STVFGTNTPR
GKLTTGQVVA RGVARTVATT VVGGIAAQLG KKVGGAMGSS VGRSIVRGTL GGLLRR