Gene RPB_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3518 
Symbol 
ID3911320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4026545 
End bp4027141 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content74% 
IMG OID637885420 
Producthypothetical protein 
Protein accessionYP_487124 
Protein GI86750628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.48447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.766393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC GCGGTCGCCA GGCCAGCACC CGCGAGGCCG CGAAGGCCGA GATCGACGCG 
TTTCGCGCCC AGCATCTGTC GTTGGCGGAG CGTCAGATCA TGACCGCCGA CGGCGTCGCC
CGCGTCACCA TCGACGACGG CGAAAGCCCG CTGGCGTGGC TGGCGCGGCG CAAGGGCCGC
GACGGCCGCA GCCTGATCAG CCATCATCAG TTCGCCGCCG GCGAGCGGCT GCGCGCCGAC
TTCACCCGGG GCAACCTGAC GCCGCGGGTG ACCTCGCACT GGGGGGCGCC GACCGGGCGC
GGCGGCGGGG CCGGCGAGAT GACCGATCTG GTGGTGGCAT CGCGCCAGCG TGTGCAGCAT
GCGGTCGAGG CCTGCGGGCC GGAGTTTTCC GGCATCCTGC TCGACGTCTG CTGCTTTCTG
CGCGGGTTGG AGGACGTCGA GCGCGAACGC GGCTGGCCGG CGCGCTCCGC CAAGGTGGTG
CTGCAACTCG CGCTCGACCG CCTGGCGAGG CACTACGGCC TGGCGCCGCC GTCCGGGACG
GCCCGTCCGA AGCTGCGCAG CTGGCTCGCC GAGGGCGCCG AGTTCGTGGT GGGGTAG
 
Protein sequence
MKRRGRQAST REAAKAEIDA FRAQHLSLAE RQIMTADGVA RVTIDDGESP LAWLARRKGR 
DGRSLISHHQ FAAGERLRAD FTRGNLTPRV TSHWGAPTGR GGGAGEMTDL VVASRQRVQH
AVEACGPEFS GILLDVCCFL RGLEDVERER GWPARSAKVV LQLALDRLAR HYGLAPPSGT
ARPKLRSWLA EGAEFVVG