| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3501 |
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| Symbol | |
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| ID | 3911303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4005281 |
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| End bp | 4006618 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885403 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_487107 |
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| Protein GI | 86750611 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGTT GGGCAATCGG AATTGCGCTG GCGGTGGTGG CTGCGCTCTG GCTGTCGCCG
GCGCGCGCCG AAAAGCGCGT CGCGCTGGTG ATCGGCAATT CCGGCTATCA GAACGTGTCG
CGGCTCGACA ATCCGAAGAA CGACGCGGTG CTGATGGCGG AGACGCTGAG TGTGATCGGC
TTCACGCTGG TCGGCGGCCG CGCCCAGCTC GATCTCGACA AGCCGTCGCT GGATTCCGCG
GTGCAGAATT TCGGCCGACA GATCCAGGGC GCCGACGTCG CGCTATTCTA CTTTGCCGGC
CACGGCGTGC AGATCAGCGG CGCCAATTAT CTGGTGCCGG TCAACGCCAA TCCGACCCGC
GAGGCCGACG TCGATTTCCA GATGGTCGAC GTCAACGTCG TGCTGCGGCA GATGCAGGCG
GCCGGAACGC GGCTGAAGAT CGTCATTCTC GACGCCTGCC GCAACAACCC GTTCGGCGCG
CGAGGACTGC GATCCTCCGA AGGTGGCCTC GCGCAGATGC GCGCGCCCGA CGGCACGCTG
ATTTCCTACG CGACCCAGCC CGGCAGCGTC GCGCTCGACG GCGGCGATGG CCACAGCCCG
TATACGCGCG CGCTGGCGGC GACGGTGAAG CGGGCCGGGC TCGATCTGTT CCAGACCTTC
AATCAGGTCG GCCTCGCGGT GATGCGTGCG ACCGGCGGCG CTCAGCAGCC CTGGGTGTCG
TCGTCGCCGA TCGACGGCAC GTTCTACTTC GTCGCGCCGG CGCTGCCGCT GCCGCCCGCG
TCGCCGTCGC CGATGCAGGA GGCGCGACTG AGCGAGACCC CGCGTCGCGA TCCCGATCGC
GCGCCGCTGA CCGATGCCGG TGCGCTGCGC GAACTGCGCG ACCGGCTGTA CGAACGCAAT
TTCGATCCCG ACGTGCCGGA CGACAAAGCC GGCTTGCGCA CGGCGATCGC CAAGTTCCAG
GAGAAGGCGG CGCTGCCGCA GACCGGGGAG GCGACCGAAG GCGTGCTCGC GCGGCTGCGG
CAGACCGACG ATCTGAAGCC GTGGGGATCG ATCGTGTACG ACCCGGACAA CGAGAAGTGG
GGAATGTCCT GGAACCACGC GTCGCGGAAA GCCGCGGTGT CGGACGCCGG CGCGAAATGC
AGCGGCGCGC CGTGCAAGGT CGAACTCAGC TTCTACGGCC AGCGCTGCGG CGCCTTCGCG
GTGTCGGCGA TGGCGTGGTC GCTGGTCGAC CGCGACAGCG TCCAGGCGGC GAAGGATGCC
GCGCTCAGCG CCTGCGGCAA GTCCGGCAAG CCGTGCCGCG TGATCGGCGC GGTCTGCGCC
GACGGCTCCG GCCGCTGA
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| Protein sequence | MERWAIGIAL AVVAALWLSP ARAEKRVALV IGNSGYQNVS RLDNPKNDAV LMAETLSVIG
FTLVGGRAQL DLDKPSLDSA VQNFGRQIQG ADVALFYFAG HGVQISGANY LVPVNANPTR
EADVDFQMVD VNVVLRQMQA AGTRLKIVIL DACRNNPFGA RGLRSSEGGL AQMRAPDGTL
ISYATQPGSV ALDGGDGHSP YTRALAATVK RAGLDLFQTF NQVGLAVMRA TGGAQQPWVS
SSPIDGTFYF VAPALPLPPA SPSPMQEARL SETPRRDPDR APLTDAGALR ELRDRLYERN
FDPDVPDDKA GLRTAIAKFQ EKAALPQTGE ATEGVLARLR QTDDLKPWGS IVYDPDNEKW
GMSWNHASRK AAVSDAGAKC SGAPCKVELS FYGQRCGAFA VSAMAWSLVD RDSVQAAKDA
ALSACGKSGK PCRVIGAVCA DGSGR
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