| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3481 |
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| Symbol | |
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| ID | 3911283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3985787 |
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| End bp | 3987040 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885383 |
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| Product | Phage major capsid protein, HK97 |
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| Protein accession | YP_487087 |
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| Protein GI | 86750591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.137838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG ACATCACCCA CGCCCCCGAG ACCAAGGCCG GCATTGCCGG CGACGATGCG
CAGCAGGTCT ACGACACGCT GATGCGCACC TTCGAGGACT ACAAGGCGGA GAACGATACC
CGGCTGCAGG CGATCGAGAA GCGGCGCGGC GACGTGCTGG CGGAGGAGAA GGTGGCGCGG
ATCGACGCGG CGCTGGATGC GCAGCAGCGC AAGCTCGACG AACTGGCGCT GAAGGCGGCG
CGGCCGCAGC TCGGCAGCGC GATCACGCCG GTTCCGGCGG CGCGCGAGCA CAAGAGTGCG
TTCGACGCCT ATATCCGCTT CGGCGACACC GCGGGGCTGC GCGCGCTCGA AACCAAGGCG
ATGTCGATCG GCTCCAATCC CGACGGCGGC TACCTGGTTC CGGACGAGCT GGAGCATACG
ATCGGCGAGC GGCTAGCGGT GGTCTCGCCG ATCCGCGCGA TCGCCGCCGT GCGGCAGATC
TCCGGCAACG TCTACAAGAA GCCGTTCATG ATCACCGGCC CCACCACCGG CTGGGTCGGC
GAGACCGCGG CGCGGCCGCA GACCGGCTCG CCGCAGCTCG ACGCGCTGTC GTTCCCGGCG
ATGGAGCTGT ATGCGATGCC GGCGGCGACC GCGAATCTGC TGGAAGACGC CGTCGTCAAT
CTCGACCAGT GGATCGCCGG CGAGGTCGAA TTGGTGTTCT CGGTGCAGGA GGGGACGGCC
TTCATCACCG GCGACGGCCT CGGCAAGCCG AAGGGCTTTC TCGCCTACCC GACGGTGGCG
AATGCCTCCT GGAGCTGGGG CAATCTCGGC ACCATCGCCT CCGGCGCCGC CGGCGCGTTC
GCCGCATCGA GCCCGTCCGA CGTGCTGATC GACCTGATCT ACGGGCTGAA GCCGGGCTAC
CGCCAGAACG CCTCGTTCGT GATGAACCGG CGCACCCAGG CGGCGGTCCG CAAGTTCAAG
GACTCCACCG GCGTCTATCT GTGGCAGCCG CCGGCGACCG TCTCCGGCCG CGCCAGCCTG
ATCGGCTTCC CGCTGGTCGA TGCCGAGGAC ATGCCGGACA TCGCCGCGAA CTCGCTCAGC
ATCGCGTTCG GCGACTTCCA GCGCGGCTAT CTGATCGTCG ACCGCCAGGG TATCCGCGTG
CTGCGCGACC CGTATTCCGC CAAGCCCTAC GTGCTGTTCT ACACCACCAA GCGCGTCGGC
GGCGGCGTGC AGGACTTCGA CGCGATCAAG CTGTTGAAGT TCGCGGCGAG TTGA
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| Protein sequence | MDYDITHAPE TKAGIAGDDA QQVYDTLMRT FEDYKAENDT RLQAIEKRRG DVLAEEKVAR
IDAALDAQQR KLDELALKAA RPQLGSAITP VPAAREHKSA FDAYIRFGDT AGLRALETKA
MSIGSNPDGG YLVPDELEHT IGERLAVVSP IRAIAAVRQI SGNVYKKPFM ITGPTTGWVG
ETAARPQTGS PQLDALSFPA MELYAMPAAT ANLLEDAVVN LDQWIAGEVE LVFSVQEGTA
FITGDGLGKP KGFLAYPTVA NASWSWGNLG TIASGAAGAF AASSPSDVLI DLIYGLKPGY
RQNASFVMNR RTQAAVRKFK DSTGVYLWQP PATVSGRASL IGFPLVDAED MPDIAANSLS
IAFGDFQRGY LIVDRQGIRV LRDPYSAKPY VLFYTTKRVG GGVQDFDAIK LLKFAAS
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