| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3454 |
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| Symbol | |
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| ID | 3911256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3960940 |
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| End bp | 3961713 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885357 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_487061 |
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| Protein GI | 86750565 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.215717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCATCG GTCATTCACG CCGCCGCCGC TCATCTTCTT CCCGCCGGTC ACAACGCCCG
TGCATCGAAA CTGCGGAGTT CAAGGTGCGG CTGCTCGTCG TCGAAGATGA TCCCGATCTC
AACCGCCAGC TCACCACCGC GCTGACCGAC GCCGGCTACG TCGTCGACCG CGCCTTCGAC
GGCGAGGAGG GGCACTTCCT CGGCGACACC GAGCCCTATG ACGCGGTGGT GCTGGACATC
GGCCTGCCGA AGATGGACGG CATCTCGGTG CTGGAAGCCT GGCGCCGCAA CGCCCGCGCG
ATGCCGGTGC TGATCCTGAC GGCGCGCGAC CGCTGGAGCG ACAAGGTGCA GGGCTTCGAC
GCCGGCGCCG ACGACTACGT CGCCAAGCCG TTCCACCTCG AGGAAGTGCT GGCGCGGATC
CGCGCGCTGC TGCGCCGCAG CGCCGGCCAC GCCCAGTCCG AACTGACCTG TGGGCCGGTG
GTGCTCGACA CCCGCACCGG CCGCGTCAGC GTCCGCGGCC ATCCGGTCAA GCTGACCTCG
CACGAGTATC GGCTGCTGGC CTATCTGATG CACCATTCCG GCCGGGTGGT GTCGCGCACC
GAACTGGTGG AGCATCTCTA CGACCAGGAT TTCGACCGCG ACAGCAACAC CATCGAGGTG
TTCGTCGGCC GCATCCGCAA GAAGCTCGAC GTCGACATCA TCCAGACCGT GCGCGGCCTC
GGCTATCTGC TGACGCCGCC GCCGGCCGAC GCCCAGCTGG CGAACCGCAC GTGA
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| Protein sequence | MFIGHSRRRR SSSSRRSQRP CIETAEFKVR LLVVEDDPDL NRQLTTALTD AGYVVDRAFD
GEEGHFLGDT EPYDAVVLDI GLPKMDGISV LEAWRRNARA MPVLILTARD RWSDKVQGFD
AGADDYVAKP FHLEEVLARI RALLRRSAGH AQSELTCGPV VLDTRTGRVS VRGHPVKLTS
HEYRLLAYLM HHSGRVVSRT ELVEHLYDQD FDRDSNTIEV FVGRIRKKLD VDIIQTVRGL
GYLLTPPPAD AQLANRT
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