Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3444 |
Symbol | |
ID | 3911246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3950595 |
End bp | 3951500 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885347 |
Product | ferredoxin |
Protein accession | YP_487051 |
Protein GI | 86750555 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.442671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0403567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAACA TTACTTTCTC TTCGCCCGTG ATGGCGAAGG ATGTCACCGT CTACGCCGTC GCCGGCGATC GCGGCACCAT TCTGGCCGTC GCCAAGGCAC ACAAGATTCC GATCCCGTTC GACTGCCAGG ACGGCGAATG CGGTTCCTGC CTGGTGCAGG TCGAGCACTT CAATCCGAAG GCCAAGTCAG CAGTCGCGCT GACCGAGAAG GAAAAGGAAG TCCTGCGCCA GCTCGGCAAG ATCACCAAGG ACGAAATCGC CAACGCCGAA GTCAACGACG TTCCGCCGCG CTATCGCCTC GCCTGCCAGT GCTTCGTGCG CAACGAGGAC ATCATGGTGC GGTTCGAGGG CGACAAGACC CTGCCGCAGA AGCTCGCGGT GACTCACGCC GCCGCGCGCT TCAAGGGTGG CCTCGAGATT TCGACGCTGC CGGAGTTCTT CAGCTACGCC GCCAAGCTCG AGGAAGACGC CGCCCTGCAC TACGACGAAC TCGCCAAGGC GATGGCCGAG GCCGGTAACG AGTCGGTCGC GAAGCTGTTC GCGCAGCTCG CCGAATTCTC GCGCATGCAC CTCGCCGAGG TGAAGGCGCG CGCCGGCAGC ATCGATGTCA GCAAGTCGGT GCCGCCGGAC TACGCCTGGC CCGATCACGC CACGCCGGAA CGCGCGGCGG TGTGGGCTTC CGACACCTCG ATGACGCGGC TCGGCGGCCT CAAGGCGGCG CTGCAGGGCG AACGTCGCGG CTACGAATTC TACCGTGCGA TCGAAGCGAC CACCAAGTCG CCCGAGGTCG CGGCCGCGGC GAAGGAATTC GTCGGTGAGG AAGCCGAGCA CGTCCGCATC CTCGAAGCCT GGATCACCCA GGAAGAATGG GCGCTCAAGC ACGCCAAGAC GGCTGAAAAC GCCTGA
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Protein sequence | MANITFSSPV MAKDVTVYAV AGDRGTILAV AKAHKIPIPF DCQDGECGSC LVQVEHFNPK AKSAVALTEK EKEVLRQLGK ITKDEIANAE VNDVPPRYRL ACQCFVRNED IMVRFEGDKT LPQKLAVTHA AARFKGGLEI STLPEFFSYA AKLEEDAALH YDELAKAMAE AGNESVAKLF AQLAEFSRMH LAEVKARAGS IDVSKSVPPD YAWPDHATPE RAAVWASDTS MTRLGGLKAA LQGERRGYEF YRAIEATTKS PEVAAAAKEF VGEEAEHVRI LEAWITQEEW ALKHAKTAEN A
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