| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3436 |
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| Symbol | |
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| ID | 3911238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3935569 |
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| End bp | 3937884 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885339 |
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| Product | histidine kinase |
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| Protein accession | YP_487043 |
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| Protein GI | 86750547 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.416045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0284383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG TGCAGGGCGC GAGCGCCTGC GCTCAATCCG ATTCGATCAA AGGATTGGCG
CAGTCGATCG CTAAACCGGC CTACCATCGA CTGTTGACGG CCGAGCCTGT GCTCCGCCGC
GCCGTCCCGA TCCTCATCAT CGCCTTCCTC ATCACGATCT GCTTCGGCGC CGCCGTGCAG
TTCATCGATC AGAGCCGGCA GAAGCGCGCT GCGCTCAATC GCGATCTCTG CGCCCTCGCC
GATCTGCTCG CCGAGCGGCT CGAACATATC GGCGTCGTGC GGCTCGATCG TCCGGCTTCG
ATCGAACGCC TGCAGAATTT GCTACCAGGC CTGATCCCGT CCTGGGGCAT CGCCGCCGGG
CGCCACGTCA TCGTCACCAG CGCCGATCAG CGCGTCCTGG CGCGCGTACC CGGCGACGAA
GGCACCAGCG CCGCCAGCAG TTTCCTCGAC ATCATCAGCG CCACCCCGCC GCTGACACGG
TCCGCGCAGC AAGGCACCAT CACCCAGATC ATCCTGCCGA GCGGCGCCTC GGCGCTGGCG
ACGTTGCACA CCGTCAAGTC GCTGCCCGGC CAAGTCATCG TCATTCACGA AGACACCGGG
TCGATCCTGC GTTCCGATGC GGCGCTGCAG ATCACGCTGT CGGCTACCAC CGGCTTCGTC
GTGCTGATCC TCGGCTTCGC CTTTCACTGG CAGTCGACCC GCGCCCAGGA GGGCGACCTC
ATCAACGATG CCGTGCGCAG CCGGATCGAC ACCGCGCTCA ATCGCGGTCG CTGCGGGCTG
TGGGACTGGG ACCTGTCGCG CGGCCGGATC TTCTGGTCGC AATCGATGTT CACTTTGCTC
GGCCTGGAGA GTCGCAACGA CCTCCTGACC TTCGGCGAGG TCAACGCGCT GGTGAACAGC
GACGACATCG ACCTGTTCGC GATCGGCGAC CAGTTGATCG CCGGCAACAC CGATCACATC
GACCACAGCT TCCGGATGCG CCACGCCAAC GGCCACTGGA TCTGGCTGCG GATGCGCTGC
GAACTCAGCC AGGAAACCCA ATCCGACAAC AAGCACCTGA TCGGCATCGC GGTCGACGTC
ACCGAGCAGA AGAGCCTCGC CGAGCGCACC GTCGAAGCCG ATCTGCGGCT GCGCGACGCG
ATCGAGACCA TCCCCGAGGC CTTCGTACTG TGGGACGCCG ACAATCGCCT GGTGCTGTGC
AATTCGCACT TCCAGCGGCT GCACAAGCTG CCCGACATCG CGGTCGCGCC CGGCACCTCC
TACGAGACGG TGATCGAGGT CGGACAGATG CCCGAGATCC GCACCCGTCT CTGCGACAAC
AGCGGAGGAT CGTCCCCCGG CGCGCGGACC TTCGAGGCCC AGCTCGCCGA CGGCAGCTGG
CTGCACATCA GCGAACGCCG CACCAAGGAC GGCGGCTACG TCGCGGTCGG CACCGACATC
ACCCGGATCA AGGCTCACGA ACAGAAGCTC GTCGACAACG ACCTGCGGCT GCGCGCCACC
GTCGCCGACC TCAAGATCTC GCAATACAAG CTGGAGCGTC AGGCGATCGA ACTCGCCGAT
CTGGCGCGGA AATATTCCGA GGAGAAGACC CGCGCCGAGG AAGCCAATCA GACCAAATCC
AAATTCCTCG CCAATATGAG CCACGAGCTG CGCACGCCGC TCAACGCCAT CATCGGTTTT
TCCGAGATCA TGGGCAGCGG CATGTTCGGC ACGCTGGGCT CGGAGAAGTA TCAGGAATAC
TGCCACGACA TCATGACCAG CGGGCACTAT CTGCTGGAAG TGATCAACGA CATTCTCGAC
ATGTCGAAGA TCGAGGCAGG TCGGATGCGG CTCGACATGG AGGAGCTCGA TCTCGCTCGC
ACCCTCGGCG AATCCCTCAA GGTCGTCGCC GGCCGCGCCG AGCACAAGCA GCTCGAACTG
CTCTCGGAGA TCGAGGACGA CATTCCGATC GTGGCGGACC GCCGGGCGGT CAAGCAGATC
CTGATCAATT TGTTGTCCAA CGCCGTGAAA TTCACCCCCG ACGGCGGACG GGTCACGGTC
CGCAGCCGGA CGCTGCCGAA CGCCATCGTG TTGATGATCG CCGATTCCGG CATCGGCATC
GCGCCGCAAT CGCTGCGCCG TCTCGGCCAG CCGTTCGAGC AGGTCGAGAG CCAGCTCAGC
AAGACCTATC ATGGCTCCGG CCTGGGTCTG GCGATCGCCA AATCGCTCAC CACGCTGCAC
GGCGGCTCGA TGCGGCTGCG CTCCACGCTC GGCGCCGGCA CGGTGGTGAT GGTGACGCTG
CCGCGCGACT GCCAGCGCCG CCGGCTGGCG GCCTGA
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| Protein sequence | MARVQGASAC AQSDSIKGLA QSIAKPAYHR LLTAEPVLRR AVPILIIAFL ITICFGAAVQ
FIDQSRQKRA ALNRDLCALA DLLAERLEHI GVVRLDRPAS IERLQNLLPG LIPSWGIAAG
RHVIVTSADQ RVLARVPGDE GTSAASSFLD IISATPPLTR SAQQGTITQI ILPSGASALA
TLHTVKSLPG QVIVIHEDTG SILRSDAALQ ITLSATTGFV VLILGFAFHW QSTRAQEGDL
INDAVRSRID TALNRGRCGL WDWDLSRGRI FWSQSMFTLL GLESRNDLLT FGEVNALVNS
DDIDLFAIGD QLIAGNTDHI DHSFRMRHAN GHWIWLRMRC ELSQETQSDN KHLIGIAVDV
TEQKSLAERT VEADLRLRDA IETIPEAFVL WDADNRLVLC NSHFQRLHKL PDIAVAPGTS
YETVIEVGQM PEIRTRLCDN SGGSSPGART FEAQLADGSW LHISERRTKD GGYVAVGTDI
TRIKAHEQKL VDNDLRLRAT VADLKISQYK LERQAIELAD LARKYSEEKT RAEEANQTKS
KFLANMSHEL RTPLNAIIGF SEIMGSGMFG TLGSEKYQEY CHDIMTSGHY LLEVINDILD
MSKIEAGRMR LDMEELDLAR TLGESLKVVA GRAEHKQLEL LSEIEDDIPI VADRRAVKQI
LINLLSNAVK FTPDGGRVTV RSRTLPNAIV LMIADSGIGI APQSLRRLGQ PFEQVESQLS
KTYHGSGLGL AIAKSLTTLH GGSMRLRSTL GAGTVVMVTL PRDCQRRRLA A
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