| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3419 |
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| Symbol | |
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| ID | 3911221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3908164 |
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| End bp | 3909408 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885322 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
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| Protein accession | YP_487026 |
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| Protein GI | 86750530 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.058581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.446493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGAGGAACGA GACGATTCAC GCTGCCGACG GCGTCGCCGT GCTGGAGTCG
CGCGGCTCGG TCGCGGAGAA TTTCGGCATT CCGCTCGCGG TGCTGCTGGA GCTGACGCAT
CGCTGTCCGC TGCAATGTCC GTACTGCTCG AATCCCGTGG AGCTCGAGCG CGGCGGCGCC
GAACTCACGA CCGACGAGTG GAAGCGCGTG CTCGGCGAAC TCGCCGCCAT CGGCGTGCTG
CAGGTGCATT TTTCCGGCGG CGAGCCGACC GCGCGCAAGG ACCTCGTCGA GCTGGTGCGA
CACGCCAGCG ACGTCGGGCT GTACACCAAT CTGATCACCT CGGCGGTGCT GCTGACGCGC
GAGCGCCTCG CGGCGCTGGC CGATGCCGGG CTGTGCCATG TCCAGATCAG CTTTCAGGGC
TACGAACCTG TCGTTGCCGA TCGCGTCGCC GGATTCGCGA ACGGCCATGC GAAGAAGATC
GAAGCCGCCC GCTGGACCCG CGAACTCGAT CTGCCGCTCA CCGTCAATGC GGTGATGCAC
CGCCAGAACC TGCATCAATT GCCGGACATC ATCGACATGG CGGTGGCACT CGACGCCGAC
CGGCTCGAAG TCGCCAATGT GCAGTATTAC GGCTGGGCGC TGAAGAACCG CGCCGCGCTG
ATGCCGACGC TGCAGCAGAT CGATGACTGC ACCGCGATCG TGGAGGCCGC GCAGTCGCGG
CTGAAGGGGC AGCTCGCGAT CGACTACGTC GTGCCGGATT ACTACGCGCT GCGGCCGAAG
ACGTGCATGG GCGGCTGGGG CCGGCAGTTC TTCAACATCT CGCCGAGCGG CAAGGTGCTG
CCGTGCCACG CCGCCGAGAC CATCACCGGG CTCGCCTTCG ACTCGGTGCG TGGAGGCGCG
TCGATCGCCG AGATCTGGCG CAATTCCGAG GCGCTGAACC GCTATCGCGG CACCTCGTGG
ATGCAGCAGC CCTGTGCGAG CTGCGCCTTC AAGGAGATCG ATTTCGGCGG CTGCCGCTGC
CAGGCCTTCG CGCTCGCCGG CGACGCCGCC GCGACCGATC CGGCCTGTGC ACTGTCGCCG
CTGCACAAGC GGATCTTCAA GACTGCGGAA GCAGAGGCGG AAGCCGGGGG CGACAAATTC
GTGTATCGCA ATTTCGCCGG CGGCACGGCG GAGGGTCGTA GCACCACCTC ACCACGTCAT
TCCGGGGCGC GCACAGCGCG AACCCGGAAT CTCGCGGTGC CATGA
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| Protein sequence | MSAARNETIH AADGVAVLES RGSVAENFGI PLAVLLELTH RCPLQCPYCS NPVELERGGA
ELTTDEWKRV LGELAAIGVL QVHFSGGEPT ARKDLVELVR HASDVGLYTN LITSAVLLTR
ERLAALADAG LCHVQISFQG YEPVVADRVA GFANGHAKKI EAARWTRELD LPLTVNAVMH
RQNLHQLPDI IDMAVALDAD RLEVANVQYY GWALKNRAAL MPTLQQIDDC TAIVEAAQSR
LKGQLAIDYV VPDYYALRPK TCMGGWGRQF FNISPSGKVL PCHAAETITG LAFDSVRGGA
SIAEIWRNSE ALNRYRGTSW MQQPCASCAF KEIDFGGCRC QAFALAGDAA ATDPACALSP
LHKRIFKTAE AEAEAGGDKF VYRNFAGGTA EGRSTTSPRH SGARTARTRN LAVP
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