| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3417 |
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| Symbol | |
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| ID | 3911219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3905955 |
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| End bp | 3906854 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885320 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_487024 |
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| Protein GI | 86750528 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.138414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.441033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGC TCGGCAATTC CGTCGACAAA TATGTCACCG GCCGGATGCT CCAGACCTCC
AACGACCGCC GCTGGTCGCA TCTGCTGGCA GAGCGCTGGA GCCACCAAGC GGGTGAGCTG
CCGTCGCTGC TGCCGCGCGA CACCGAGATC GCCGTGCTGC TGCGCGGCAG TTCCGTGGTG
GATCGCGCGG GCGGCGGCAT GCGCCAGCGG ACCCATGGCA GACGCGGAAC GATCTGGCTG
TGCCCGGCTG GCATCCGCGA GGATTTCATT CGCGTCGAGA GCGAGATGCA CGAGTGTCTG
CATATTTTTC TGCCCGGCCG ACCGTTCGAC GATACGATGC TGCAGGACAT GGACATCGAC
CCGGCGCGGA TCGGCATTCG CTACGAGGCG ATCGGTCAGG ATATCTTCAT CGACTATGTC
GCCGACCAGA TCGTCCGGGA ACTTGCCGAA GAGAGCTCGA CAGGGCGGCT GCTGATCGAG
AGTCTGGGAC GTGCGCTGAC CGCCCATCTG GTGCATCGCT ACGCCGACAC GGCGGTGCCG
CGCAAGCCGG CGAATGCTGC CAGCCGCCCG CTCGACGCCA AGCGCCTGAC ACGGGTGACG
GACTTCATCA ACGCCTCGGT CGAGCGCGAT TTCACCGTCA GCGACCTCGC CGCGGTCGCC
TGCATGAGCC CGGCGCATTT CTCCCGCAGC TTCAAGGCGG CGACCGGCTG CGCGCCGCAT
GAATATCTCA GCCGGCAGCG GCTCGATCTG GCCAAGCGGC TGCTGGCGAG CGGCCATCGC
TCGCTGGCCG ATATCGCCTA CGCCACCGGC TTCTCGTCGC AGGCGAACTT CAACCGGGCG
TTTCGCAAGG CGCTCGGCAC CACGCCCAGC GCCTACCGCG CGCAACAGCG ATCGGATTGA
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| Protein sequence | MGTLGNSVDK YVTGRMLQTS NDRRWSHLLA ERWSHQAGEL PSLLPRDTEI AVLLRGSSVV
DRAGGGMRQR THGRRGTIWL CPAGIREDFI RVESEMHECL HIFLPGRPFD DTMLQDMDID
PARIGIRYEA IGQDIFIDYV ADQIVRELAE ESSTGRLLIE SLGRALTAHL VHRYADTAVP
RKPANAASRP LDAKRLTRVT DFINASVERD FTVSDLAAVA CMSPAHFSRS FKAATGCAPH
EYLSRQRLDL AKRLLASGHR SLADIAYATG FSSQANFNRA FRKALGTTPS AYRAQQRSD
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