Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3395 |
Symbol | |
ID | 3911197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3880910 |
End bp | 3882502 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885298 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_487002 |
Protein GI | 86750506 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.109713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.424622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGC CCGCCGAAAA GCCCGAAGTC TTCCAGCTTC CGGCTGAGTC CCCGGTGGTC GCCCCGGCAC GCAACCGGCG CGCTGCGGCT CAACGCGTCC GCGAAGCGCG CGACCGGCTG ACCTCGACCA GCGGCACCCG CCCCGCCTTC GACCACGAAC TGGTCCGGCA ATTCGCGCAG ACCCGATTGT CGGCGTCCTT CGTCATCATG CTGCTGGTGG TGGTCACCGG CATCCTGTTC GCATTCTGGT TCGATCCGGT CACCGCCGGC GCCTGGACCG TCGGGATGCT GTGCATCCAC GCCGTGATGA TCCGCAACTG CAGCCGCTTC CTGCAGGAGC CCGCCTCGCC GCCCCGCACC CGAAGCTGGC GACGCCGCTT CGTCGCGCTC GATCTGCTCT ACGGGCTCGC CTGGACCACG ATCCTGGTGC ATCCGCTCGG GCTGACGGTC GTCTCCAACA CGCTGCTGAT GTTCCTGATG CTGCTGGTGG TGGCGGTGTC GAGCATGCTG GCGGCCAGCC TGCCGATCGC CGCGCTGGCG GCGACCGTCC CGGTCACCGC CGCGATCACG CTGAACTTCG TGCTCGGCGG CACTTTCGAC AGCTACGTGC TGGCGGCGCT GACCGTCGCG GCGGAAGGTT ACTTCGCGCT GCTGGCGCAT CGCCTGCATT CGACGACGCT GGCGACGCTC GAGGCGCGCG CCGAGAAGGA CGCACTGATC GGCGAGCTGG AACAGGCCAA GGCGATTTCC GACGAGGCGC GGCATCGCGC CGAGGCCGCC AACGTCGCCA AATCGCGGTT CCTGGCGCAG ATGAGCCACG AGCTGCGCAC GCCGCTCAAC GCCATCCTCG GCTTTTCCGA AGTGATGAAG AGCGAGATTT TCGGCGCCCA CGCGGTGCCG GTGTACAAGG AATACTCGGC GGACATCCAC AACTCCGGCG TCCACCTGCT CAATCTGATC AACGAAATCC TCGACCTGTC GCGGATCGAG GCGGGTCGCT ACGAACTCAA CGAGGAAGCG ATCTCGCTGG TCCATGTGGT GACGGACTGC CATCATCTGC TGAAGCTGCG CGCCTCCAGC CGCGGCATCA CCATCCACGA AGTGTTCGAA CAGGGCATGC CGCGGATCTG GGGCGACGAG CGCGCGGTGC GTCAGGTGGT GCTCAACCTG CTCTCCAACT CGATCAAGTT CACGCCGCAG GGCGGCGAAA TCTGGCTCAA GGTCGGCTGG ACCGCGTCCG GCGGACAGTA TCTCAGCGTC AAGGACACCG GCTCGGGCAT CCCCGAAGAG GAAATCCCGG TGGTGCTGGC GTCGTTCGGC CAGGGCTCCA ATTCGATCAA ATCCGCCGAA CAGGGCGCTG GCCTCGGCCT GCCGATCGCC AAGAGCCTGG TCGACATGCA CGGCGGCACC TTCACGCTGA AATCGAAGCT GCGGATCGGC ACCGAAGTGA TCGTCACCTT CCCGCCGGAG CGGGTGATGT CGGCGCTGGC GCCGATGGCC GACGAGGCGC CGCTGCAGCC CGGCTTGGTC GAGAACGACG ACCGCAGCCG CGCGCGCGGC AAGCCGATCA TGAACGCCGG CACCGGGCTG TAG
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Protein sequence | MSEPAEKPEV FQLPAESPVV APARNRRAAA QRVREARDRL TSTSGTRPAF DHELVRQFAQ TRLSASFVIM LLVVVTGILF AFWFDPVTAG AWTVGMLCIH AVMIRNCSRF LQEPASPPRT RSWRRRFVAL DLLYGLAWTT ILVHPLGLTV VSNTLLMFLM LLVVAVSSML AASLPIAALA ATVPVTAAIT LNFVLGGTFD SYVLAALTVA AEGYFALLAH RLHSTTLATL EARAEKDALI GELEQAKAIS DEARHRAEAA NVAKSRFLAQ MSHELRTPLN AILGFSEVMK SEIFGAHAVP VYKEYSADIH NSGVHLLNLI NEILDLSRIE AGRYELNEEA ISLVHVVTDC HHLLKLRASS RGITIHEVFE QGMPRIWGDE RAVRQVVLNL LSNSIKFTPQ GGEIWLKVGW TASGGQYLSV KDTGSGIPEE EIPVVLASFG QGSNSIKSAE QGAGLGLPIA KSLVDMHGGT FTLKSKLRIG TEVIVTFPPE RVMSALAPMA DEAPLQPGLV ENDDRSRARG KPIMNAGTGL
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