| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3390 |
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| Symbol | |
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| ID | 3911192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3874401 |
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| End bp | 3875006 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637885293 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_486997 |
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| Protein GI | 86750501 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.126574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGCCT TGCTGGGACT GAGCAGGAAG ATCGACGCGT TCAACACGCT GATCGGGCGC
TGGTTGTCGT GGATGATCGT CGTCGCGGTG ATCATTTCGG CGGGCAACGC GGTCATCCGC
AAGGTGTTCG ACATGTCGTC GAACTCCTTC CTCGAGGCGC AATGGGTGCT GTTCAGCGTC
GTGTTCCTGC TGTGCTCGCC CTGGACGCTG CTCAAGAACG AACATATCCG GATCGACATC
ATCAATCATT CCCTGCCGCT GAAAGTCCGC GGCTGGATCG ACATGATCGG CCATGTGTTC
TTCCTGATGC CGTTCGCGAT CATCCTGCTG TGGTGGTCGA TCCCGTTCTT CCTGGTCTCC
TACCACCAGA ACGAACAATC GTTCAGCGCC GGCGGCCTGC CGCAATGGCC GGCGAAGTCG
CTGATCATGA TCGCCTGCGT CCTGCTGATC GTTCAGGGCA TCTCGGAAAT CATCAAGCGC
GCTGCGATGA TGGCGGGGGT GATCCCCGAC AGCAACGTGC TGCAGGGGTC GGCGCATGCG
GCGGAACTCG AAGCCGAGCG GCTGGTGATG CATATCGCCG GCGAGAAGCA GCCTCGAGCC
GAATAG
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| Protein sequence | MQALLGLSRK IDAFNTLIGR WLSWMIVVAV IISAGNAVIR KVFDMSSNSF LEAQWVLFSV
VFLLCSPWTL LKNEHIRIDI INHSLPLKVR GWIDMIGHVF FLMPFAIILL WWSIPFFLVS
YHQNEQSFSA GGLPQWPAKS LIMIACVLLI VQGISEIIKR AAMMAGVIPD SNVLQGSAHA
AELEAERLVM HIAGEKQPRA E
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