Gene RPB_3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3385 
Symbol 
ID3911187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3870352 
End bp3870861 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID637885288 
Producthypothetical protein 
Protein accessionYP_486992 
Protein GI86750496 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATC TGTCGAAAGC CCTGCCGGCC GTCGTGCTGG CGCTCGGCCT GGCGTTGTCG 
GTCGGCCATG CGCAGGCCCA GACCAAGCCG CCGTCGCCGG CGGCGATCGC CGCCGCCAAG
GAGATCCTGG AGCTGAAACG CGCCAACACG ATCTACGCCA ATGCGGTGCC GAACATCGTC
CAGCGCACCA TGGACACCTT GATGCAGACC AATCTGAACT ATCAGCAGGA TCTCAAGGAA
GTCGCCATGG TGGTCGCCAA GACCATGGCC GGCCGCGAGA AGGAAATCGG CGACGGCATG
GCGAAGATCT ATGCCCAGGA CTTCACCGAG CAGGAGCTGA AGGATCTGGT GGTGTTCTAC
AAGACGCCGC TCGGCCAGAA GCTGCTGAAC GAAGAGCCGA AGGCGATCCA GCAGAGCATG
GCCTACATGA ATCAGTGGGC GCAGACCTTC GCCGAAGAGG TCAACGGCCA GTTCCGTGCC
GAGATGCGCA AGCGCGGCAA GGCGATCTGA
 
Protein sequence
MKYLSKALPA VVLALGLALS VGHAQAQTKP PSPAAIAAAK EILELKRANT IYANAVPNIV 
QRTMDTLMQT NLNYQQDLKE VAMVVAKTMA GREKEIGDGM AKIYAQDFTE QELKDLVVFY
KTPLGQKLLN EEPKAIQQSM AYMNQWAQTF AEEVNGQFRA EMRKRGKAI