| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3320 |
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| Symbol | |
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| ID | 3911121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3798800 |
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| End bp | 3799432 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637885222 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_486927 |
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| Protein GI | 86750431 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.227871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACC TCGTCACAGC AGAAAATGCT GCTGCGTATC ACGAATTGAT GGAGCAAGCG
TTCCGGCTAC GGCATGCGGT GTTTGTCGAC GAATTGGGCT GGCACGACCT AAAGCGCGAA
GATGGACGTG ACGTCGATCA ATTCGACGAC GGCCGCGCGC TGCATATGCT GTACGTCGAG
AACGGTCGCG TGCTCGGCTA TCAACGTATG TTGCCTTCAC TTCGCCCGCA CCTGCTATCG
GACGTACTGC GGCATTTGTG CGATGGCGAT CTTCCGGTCG GGCCGCAGAT TTGGGAATGG
ACACGCTATT GCGTCGCACC AGGCTGCCGG GATCGTGGCC GAATGCTGAG TCCGGTTGGC
AACATGCTAC TATCGGCGAT TGTCGAGTGG GGTCTCGAAA GCGGCGTTTC CGAGATCATC
ATCGAAATGA ATCCGATCTG GCTGCTGCGG CTGGTGCAGC TCCACTTCAG GGTGACGCCG
CTTGGCATCC CGCAGAAGGT CGGGAAAGAC GACGTCGTCG CCGTGACGGC CGCATTCGAT
CGTAGGACGC TGAATCGCCT TCGCGAAATG CGAGGTGACG AGCGAGAGGT GATTGTGTCG
CGCCCGATAT CGACTAGGCG GCTGCTCGCC TGA
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| Protein sequence | MIHLVTAENA AAYHELMEQA FRLRHAVFVD ELGWHDLKRE DGRDVDQFDD GRALHMLYVE
NGRVLGYQRM LPSLRPHLLS DVLRHLCDGD LPVGPQIWEW TRYCVAPGCR DRGRMLSPVG
NMLLSAIVEW GLESGVSEII IEMNPIWLLR LVQLHFRVTP LGIPQKVGKD DVVAVTAAFD
RRTLNRLREM RGDEREVIVS RPISTRRLLA
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