Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3296 |
Symbol | |
ID | 3911097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3766355 |
End bp | 3767311 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885198 |
Product | malonate decarboxylase subunit beta |
Protein accession | YP_486903 |
Protein GI | 86750407 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.966194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACT GGAACAAGAT ACAAACCAGC TCCTTCTTCG AGAGCAATGC GCGCGAGCGT GCGCTCGGAC TGGTCGACGA AGGTAGCTTC GTCGAACTGG TCGGCCCGAT CGACCGGTTC TGCAGCCCGC ATCTGATCAC GCTCGGCGAG GCCGTCGAAT TCGACGACGG CATCGTCACC GGCGTCGGTC GGATCGGCGA ACGTCCGGTG TTCGTGATCT CGCAGGAAGG CCGCTTCATC GGCGGCTCCG TCGGCGAAGT CAGCGGCGCC AAGATGGTCG GTACGATCGA TCAGGCGATC GATTTCTACG ACGCGCTGAT CGCCGAATTC CCGCGGCTGC CGGCGTCGCA GCGGCCGATC GTGGCGATCT CGTTCGAAAC CGGCGGCGTG CGGCTGCACG AAGCCAATGC CGGTCTCCTG GCCCACGCCG AAGTGATGGA CGCGATTCAG CGTGCCCGAC ACAAGGTGCC GATCGTCTCG CTGATCGGGT CGCGGATCGG ATGCTTCGGC GGCATGGGTT TCGTCGCCGC CTCGACCGAC GCGATCATCA TGAGCGAATT CGGCCGTCTC GGCCTGACCG GTCCTGAAGT GATCGAGCAG GAGATGGGCA AGGACGAGTT CGACAGTTCG AACCGCGCGC TGGTCTATCG CACCACCGGC GGCCGCCACA AATACGTGAT GGGCGACTGC AACTTCCTGG TCGACGACAC CGTCGCGGCG TTCCGCGCCC AGCTCACCGA ACTGACCGAG CTGACGATCG AGGAGTTCGA GCCGATGCGC CGCATCGGTT CGGAGGCGCT CGTCGAGAAG CAACTGCGCG GCGTCGCGCT CGCCGTCGAG ATCGCCCCGA CCGATTCCCG CGACGTCTGG CGATACGCCG GCAACAACGA TCCCGTCGGT CTCGCCGATG GTCCCCTCGC GGACTTCCGC AAGACCGTGC AACGCCTGGT TCTGTGA
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Protein sequence | MPNWNKIQTS SFFESNARER ALGLVDEGSF VELVGPIDRF CSPHLITLGE AVEFDDGIVT GVGRIGERPV FVISQEGRFI GGSVGEVSGA KMVGTIDQAI DFYDALIAEF PRLPASQRPI VAISFETGGV RLHEANAGLL AHAEVMDAIQ RARHKVPIVS LIGSRIGCFG GMGFVAASTD AIIMSEFGRL GLTGPEVIEQ EMGKDEFDSS NRALVYRTTG GRHKYVMGDC NFLVDDTVAA FRAQLTELTE LTIEEFEPMR RIGSEALVEK QLRGVALAVE IAPTDSRDVW RYAGNNDPVG LADGPLADFR KTVQRLVL
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