Gene RPB_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3296 
Symbol 
ID3911097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3766355 
End bp3767311 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content65% 
IMG OID637885198 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_486903 
Protein GI86750407 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.966194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACT GGAACAAGAT ACAAACCAGC TCCTTCTTCG AGAGCAATGC GCGCGAGCGT 
GCGCTCGGAC TGGTCGACGA AGGTAGCTTC GTCGAACTGG TCGGCCCGAT CGACCGGTTC
TGCAGCCCGC ATCTGATCAC GCTCGGCGAG GCCGTCGAAT TCGACGACGG CATCGTCACC
GGCGTCGGTC GGATCGGCGA ACGTCCGGTG TTCGTGATCT CGCAGGAAGG CCGCTTCATC
GGCGGCTCCG TCGGCGAAGT CAGCGGCGCC AAGATGGTCG GTACGATCGA TCAGGCGATC
GATTTCTACG ACGCGCTGAT CGCCGAATTC CCGCGGCTGC CGGCGTCGCA GCGGCCGATC
GTGGCGATCT CGTTCGAAAC CGGCGGCGTG CGGCTGCACG AAGCCAATGC CGGTCTCCTG
GCCCACGCCG AAGTGATGGA CGCGATTCAG CGTGCCCGAC ACAAGGTGCC GATCGTCTCG
CTGATCGGGT CGCGGATCGG ATGCTTCGGC GGCATGGGTT TCGTCGCCGC CTCGACCGAC
GCGATCATCA TGAGCGAATT CGGCCGTCTC GGCCTGACCG GTCCTGAAGT GATCGAGCAG
GAGATGGGCA AGGACGAGTT CGACAGTTCG AACCGCGCGC TGGTCTATCG CACCACCGGC
GGCCGCCACA AATACGTGAT GGGCGACTGC AACTTCCTGG TCGACGACAC CGTCGCGGCG
TTCCGCGCCC AGCTCACCGA ACTGACCGAG CTGACGATCG AGGAGTTCGA GCCGATGCGC
CGCATCGGTT CGGAGGCGCT CGTCGAGAAG CAACTGCGCG GCGTCGCGCT CGCCGTCGAG
ATCGCCCCGA CCGATTCCCG CGACGTCTGG CGATACGCCG GCAACAACGA TCCCGTCGGT
CTCGCCGATG GTCCCCTCGC GGACTTCCGC AAGACCGTGC AACGCCTGGT TCTGTGA
 
Protein sequence
MPNWNKIQTS SFFESNARER ALGLVDEGSF VELVGPIDRF CSPHLITLGE AVEFDDGIVT 
GVGRIGERPV FVISQEGRFI GGSVGEVSGA KMVGTIDQAI DFYDALIAEF PRLPASQRPI
VAISFETGGV RLHEANAGLL AHAEVMDAIQ RARHKVPIVS LIGSRIGCFG GMGFVAASTD
AIIMSEFGRL GLTGPEVIEQ EMGKDEFDSS NRALVYRTTG GRHKYVMGDC NFLVDDTVAA
FRAQLTELTE LTIEEFEPMR RIGSEALVEK QLRGVALAVE IAPTDSRDVW RYAGNNDPVG
LADGPLADFR KTVQRLVL