| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3287 |
|---|
| Symbol | |
|---|
| ID | 3911088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3759757 |
|---|
| End bp | 3760335 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885189 |
|---|
| Product | BioY protein |
|---|
| Protein accession | YP_486894 |
|---|
| Protein GI | 86750398 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1268] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.508525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCAC AATCCGCCGC GCGTTTCGGC ACCCGCGATC TCGCCCTGGT CGGCCTCGGC
GCCGGCCTGA TCATGGCGCT CGGAGCCATT CCGCCGATCG TCGTCGGCGT GTTGCCGGTG
CCGATCACGC TGCAGTCGTT GGGCGTGATG TTGGTCGGTC TGATGTTCGG GCCGAAACGC
GGGGCGCTCG CCTGCCTCAC GGTGCTGGCG CTGGTCGCTG CGGGCCTGCC GGTCCTGGCC
GGCGGTCGCG GCGGACTGGC GGTGTTCGCC GGTCCCACCG TCGGCTATCT GCTCGCCTGG
GCGCCGGCGG CCTATGCCGT CGGCTTCCTG GCGATGCGTG CCGAGGCGTT GCAGCGGCCA
TTGTGGCGCG GGATCGCCTA TCTGGCGGCG ACGATCTTCG GAGGGATCAT CGTTCTTCAC
CTCGGCGGCA TTCTGTGGCT CGCAGCGGTC AGTCACATCA ACGTCGCGAC GGTGATGTTG
GGCTCGCTGG CGTTCTTGCC GGGCGATCTG ATCAAGGCCG TGCTCACCGT CCTGATCGTG
CAGCGGGTCG AGGCGATGCT GACTTTGCCG AGGCTCTGA
|
|---|
| Protein sequence | MMSQSAARFG TRDLALVGLG AGLIMALGAI PPIVVGVLPV PITLQSLGVM LVGLMFGPKR
GALACLTVLA LVAAGLPVLA GGRGGLAVFA GPTVGYLLAW APAAYAVGFL AMRAEALQRP
LWRGIAYLAA TIFGGIIVLH LGGILWLAAV SHINVATVML GSLAFLPGDL IKAVLTVLIV
QRVEAMLTLP RL
|
|---|
| |