| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3207 |
|---|
| Symbol | |
|---|
| ID | 3911008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3668598 |
|---|
| End bp | 3669572 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637885109 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_486814 |
|---|
| Protein GI | 86750318 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAG CGGTGGTGTG CCGCGAGCTC GGTCCGCCCG AGGCGCTGCG GCTTGAAGAG
ATCGAACGCA AAGCGCTGAA GCCGGGCGAG GTGCGCGTCG CGATCCGGGC GGCGGGGATC
AACTTCCCCG ACATTCTGAT GTGCGCCGGC GAGTATCAGC TCAAGCCGGA ACTGCCGTTC
ATTCCCGGCG TCGAGGCGGC CGGCGACGTG ATCGAAACCG GCGAGGGTGT CAGCGATGTG
CGCGTCGGCG ACAAGGTGAT CGTCAAGCTG CGGTTCGGCG CCTATGCGCA GGAGGTCGCG
GTGGCGGCGT CGCAACTGAC GCCGATGCCG CCGAATTTCG ACTACGCCGA GGCCGCGACC
TATCTGGCCG GCCACGGCAC CGCCTGGCAC GGCCTGGTCG ATCGCGGGCA GTTGAAAAAG
GGCGAAGTGC TGTTGGTGCA CGGCGCTGCC GGCGGCGTCG GGCTGGCCGC GGTCGAACTC
GGCAAATATC TCGGCGCGAC CGTGATCGCG GCGGCGTCGA GCGAGGAGAA GCTCGCGGTG
GCGCGCGCCC GCGGCGCCGA TCACGGCATT CTGTACGGCG CCGAGCCGTT CCGCGATGCG
GTCAAGCGCA TCACCGGCGG CCGCGGCGCC GACGTAGTGT TCGATCCGGT CGGCGGCGCG
ATCTTCGAGG ACAGCGTGCG CTGTATCAAT TGGGGCGCGC GGCTTCTCGT GGTCGGTTTC
ACCGGCGGCA TCGGCCTCGC GCGCACCAAT CTGATCCTGA TGAAAGGCGC CAGCGTGATC
GGAGTCCGCG CCGGTGAGGC GGTGCGGCGC GATCCGGCGC TCGGCGAACG GCGCATCGCG
GCTTTGCTTG ATCTCGCCGC GAAGGGCGTG CTGCGCCCCA ACGTCTCGCA CCGGTTGCCG
CTGGCGCAAT GGGCGCAAGG GATGCGGCTT CTGATCGAGC GCCGCGCCAT CGGCCGGGTC
GCGCTGCTGC CGTAG
|
|---|
| Protein sequence | MAKAVVCREL GPPEALRLEE IERKALKPGE VRVAIRAAGI NFPDILMCAG EYQLKPELPF
IPGVEAAGDV IETGEGVSDV RVGDKVIVKL RFGAYAQEVA VAASQLTPMP PNFDYAEAAT
YLAGHGTAWH GLVDRGQLKK GEVLLVHGAA GGVGLAAVEL GKYLGATVIA AASSEEKLAV
ARARGADHGI LYGAEPFRDA VKRITGGRGA DVVFDPVGGA IFEDSVRCIN WGARLLVVGF
TGGIGLARTN LILMKGASVI GVRAGEAVRR DPALGERRIA ALLDLAAKGV LRPNVSHRLP
LAQWAQGMRL LIERRAIGRV ALLP
|
|---|
| |