Gene RPB_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3173 
Symbol 
ID3910974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3631151 
End bp3631633 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID637885075 
Productflavodoxin FldA 
Protein accessionYP_486780 
Protein GI86750284 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA ACGTCATTTT CGGCTCCGAC GCCGGAGCCA CCAAAGCAGT AGCGACGCGT 
ATCGCGAAAC ACACCAACGG ACGGGCGATC GACATCAAGG CCGCGAGCGT CGCCGATTTC
GAGAACTGCT CGTTGCTGAT TCTCGGATCG CCGACCTACG GCGCCGGCGA TCTGCAAACC
GATTGGGAAG CCCATCTCGA CAAGCTGCAG CAGGCCCGGC TGACCGGCAA GAAAGTGGCG
CTGTTCGGCA CCGGGGATCA GGTCAGCTAT CCGGACTGCT TCGTTGACGC GATGGGCGTG
CTGTACGATC TCGTCGTCGA GCAGGGCGCC ACGGTGGTCG GCTTCACCGC GACCGCGGGC
TACGATCACA CCGGCTCGCG CGCGGAGCGC GACGGCCAGT TCGTCGGGCT GCCGCTGGAT
CAGGACAATC AGTCATCCAA GACCGAGAAG AGGATCACCG AATGGGTCAG TCGGCTGAGC
TGA
 
Protein sequence
MSVNVIFGSD AGATKAVATR IAKHTNGRAI DIKAASVADF ENCSLLILGS PTYGAGDLQT 
DWEAHLDKLQ QARLTGKKVA LFGTGDQVSY PDCFVDAMGV LYDLVVEQGA TVVGFTATAG
YDHTGSRAER DGQFVGLPLD QDNQSSKTEK RITEWVSRLS